Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30452g00008 ATGAAGAATGGTGGCGAGTTTCCTTATAATCTGCAGGGGATCCTTGTGATGGGGAAGGCTTTGATTTTTGAGTGCGGACCTTTTTGTAGTTGTAGTTCTTCACAGAATGGGGTGAAGAACAGGTTGGAGGTTTTTAGGTCTAGGCAGACCTTGGACCTTATTCAAGCTGGTTCTTTTATCTGTGAGTATGCTGGGGTTGTTTTGACTAGGGAGCAAGCACAGCTTTTGATGATGAATGGTGATGCGTTGATATATCCTAATCGATTTTCTCAAAGGTGGGCAGAATGGGGTGATGGTTCGGTTTGTTCTGTTTGA 315 0.4381 MKNGGEFPYNLQGILVMGKALIFECGPFCSCSSSQNGVKNRLEVFRSRQTLDLIQAGSFICEYAGVVLTREQAQLLMMNGDALIYPNRFSQRWAEWGDGSVCSV 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30452g00008 104 Gene3D SET domain 1 103 IPR046341 -
Stsc30452g00008 104 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 2 96 - -
Stsc30452g00008 104 SUPERFAMILY SET domain 3 83 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30452g00008 Stsc-Chr30452 42579 42893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30452g00008 2 81 Su(var)3-9 homologs AT5G04940 46.154 1.78e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30452g00008 - K11420 aip:107626851 172.555