Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30452g00003 ATGTTTTCTCTTCCCACCATTGCTCTTCTCTTCTCTCTTCTCCTTCTTCTTCTCCTTCTCCAAATAATCCTCTCTTCCAAGAGAAACAAAGCTCCATCTTTGAGTTACCCTCCAAGCCCACCATCATTTCCCATAATTGGCCATCTCCACCTCCTCAAACCCTTACTCCACCAAGCCTTCAAAGACCTCTCACAAAAATATGGACCCCTCATACTCCTTAAAATCGGTTCGGCTAGGTTTGTGGTTGCGAACAATCCTTCTCTAACCAAAGAATTTCTCAAGCTAAATGAGCTCGCGTACTCTTCGCGAAACATGAACATGGCCATAGACATGGTTACCTACCATGATTCTAGCTTTGCTTTTGCCCAATGTAACAACTATTGGAAGTTTATAAAGAAACTAAGCATTAGTGAGCTTTTAGGGAGCCGAAGTCTGTTGCGATTTCTCCCCGTTCGAACAAGGGAAATCCATGAATTCGTTCAATCTCTAGCTGAAAAATCGATGGCAAACGAGAGCGTGAATCTAACCGAAATGCTTATGAAACTCTCCAACAACATCATATCTCAAATGATGCTTAGCATCAAGAGTTCTGGGACAGATGACCAAGCTGAAGAGGCTAGGGTTTTGGCCCGAGAAGTGACAAAGATCTTTGGAGAGTTCAATATTTCAGATTTCATAGGGTTCCTTAAGGTGTTGGACTTGCAAGGTTTCAAGAAGAGAGCAATGCAGATACATAAGAGGTATGATGCATTATTGGAGAAGATTATCTCTGACCGTGAGACATTAAGATACAAGATGAATACTATGAATAAGAGTAGCAGTTGTGAAGAAGATGTGAAGAGTTTTCTTGACATTTTACTTGATGTTTCTAAGGACAAAGACTCCGAGATTGAGTTAACCAGAAATCATATCAAAGCATTGATCCTTGATTATTTCACTGCAGCAACAGATACCACTGCAGTCTCTGTACAATGGGCAATAGCTGAACTGTTCAACAATCCAAGGGTCTTGAAGAAGGCACAAGAAGAGATGGACAGAGTCACTGGGAACCAAAGATTGGTATGTGAAGAGGACAGTCCAAACCTTCCATACATCCATGCAATCATAAAAGAAACACTAAGACTGCATCCTCCAATACCACTCCTTATAAGGAAAGGCCTCACAGATTGCATAGTTGGTGGTTACAAGATCCCCAAGGGCTCAATGGCATGCATTAATATTTGGGCCATGGGCCGAGACCCGACTCTGTGGGAGAGCCCAACAGAGTTTAGGCCCGAGAGGTTTCTTGAAGGAGAAGGCAACACATTAGATATCAAAGGCAACCACTTTGAGCTATTGCCCTTTGGATCCGGAAAGAGGGGTTGTCTTGGAATGAACTTGGCCTTGAGGGAGTTACTTGCCATTATTGGAGCTCTTCTTCAATGCTTTGATTGGAAGATGTTTGATTCTGAAGGGAAGTTGTTAAGTTATGGAATACCTATTGATATGGATGAACAGCCAGGATTAACTGTTCCTAGAGCCCATGATCTTATTTGTGTCCCAGTTGCAAGACTCAATCCTATTCCACTTTTGCAGCCTAGGGCATAG 1587 0.4247 MFSLPTIALLFSLLLLLLLLQIILSSKRNKAPSLSYPPSPPSFPIIGHLHLLKPLLHQAFKDLSQKYGPLILLKIGSARFVVANNPSLTKEFLKLNELAYSSRNMNMAIDMVTYHDSSFAFAQCNNYWKFIKKLSISELLGSRSLLRFLPVRTREIHEFVQSLAEKSMANESVNLTEMLMKLSNNIISQMMLSIKSSGTDDQAEEARVLAREVTKIFGEFNISDFIGFLKVLDLQGFKKRAMQIHKRYDALLEKIISDRETLRYKMNTMNKSSSCEEDVKSFLDILLDVSKDKDSEIELTRNHIKALILDYFTAATDTTAVSVQWAIAELFNNPRVLKKAQEEMDRVTGNQRLVCEEDSPNLPYIHAIIKETLRLHPPIPLLIRKGLTDCIVGGYKIPKGSMACINIWAMGRDPTLWESPTEFRPERFLEGEGNTLDIKGNHFELLPFGSGKRGCLGMNLALRELLAIIGALLQCFDWKMFDSEGKLLSYGIPIDMDEQPGLTVPRAHDLICVPVARLNPIPLLQPRA 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30452g00003 528 Gene3D Cytochrome P450 26 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 Pfam Cytochrome P450 37 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 SUPERFAMILY Cytochrome P450 37 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Stsc30452g00003 528 PANTHER STEROID 21-HYDROXYLASE-RELATED 16 507 - -
Stsc30452g00003 528 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30452g00003 528 FunFam Cytochrome P450 family protein 27 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30452g00003 Stsc-Chr30452 15501 17643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30452g00003 11 526 Cytochrome P450 AT5G06900 39.429 1.41e-134 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30452g00003 K23179 - gmx:100783503 714.146