Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30448g00004 ATGACGCTGTCAGAGTTCACAGGCTACACCTCCGGTGGCGGTAGCGGTGTCGCCTTGGAGTTGAAGGGGCCTACGCCAAACGAGATGCTTTGTTCCCCGATGGGGCCAAAGGAGCGGTCCACAGAGGAAATGCGGTTCAACCAGCTTGGCGGTGAGTTCTCATCCTATCGCCACTCGGGTGGGTCTTCAATGGGTCGCTCAAGGATCGCAAACAAAAGGAGGATTGAGTCTGTGGTGGTTCTGCTTGAGCTTTTGCAGCAACTCAAGTCTTCTGATTTTATTGATCAGCAAGAGTATGAAGAATGA 306 0.5261 MTLSEFTGYTSGGGSGVALELKGPTPNEMLCSPMGPKERSTEEMRFNQLGGEFSSYRHSGGSSMGRSRIANKRRIESVVVLLELLQQLKSSDFIDQQEYEE 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30448g00004 101 MobiDBLite consensus disorder prediction 1 41 - -
Stsc30448g00004 101 Pfam Plant specific eukaryotic initiation factor 4B 1 68 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30448g00004 Stsc-Chr30448 37327 37757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30448g00004 1 56 Eukaryotic Initiation Factors Gene Family AT3G26400 50.000 1.22e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30448g00004 - - aip:107631697 83.9593