Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30448g00003 ATGATGGATTGGAGGAGGCTGAACTCATACGTGAAATCGAAGTGGACATCGACGGTGGCTAGCACATGGATTCAATGCACCAGCGGATCACTCTACACTTTCTCAATCTATTCCCAAACCCTAAAGTCAACGCTTCACTACAATCAGTCAACTCTCAACACTGTCTCCGTCTGGAAGGACATAGGAGTCAACGTCGGTGTTATTTCCGGCCTTCTCTACGACTTCGCTGCCCGCCGAACACCCAACGGGCCTTGGCTGGTCCACTTATTGGGCTCGGCCCAATGCTTCTTGGGCTACTTCCTTATTTGGGCTGCGGTTGCCGGCGTCATGGCACCGGTGCCCGTGCCTGTCGTGTGCCTATTCATGTTCGTGGCAGCCCAGGCTCAGAGCTACTTCAACACTTCCAATGTTGTCACTGGCGTTCATAACTTCCCTGACTATAGTGGAACCATTGTGGGCATTATGAAGGGATTTCTTGGTCTCAGTGGAGCAATGCTAATTCAAGTGTACAAGACAATATTCAACAACAAGCCTAAATCATATCTTCTGATGCTAGCTCTCTTGCCACCGATAAATACTTTGCTGCTTATGTGGTTTGTAAGAATCCACAACACCCGAGAGGGAGATGAAAGGAAATATCTAAACATGTTTTCTTCTATGGCTGTTGTGGTCGCTGCGTATCTAATGACTGTTATAATCCTAGAGAACATCCTTAGTCTGCCATCAATTATCTACGTGGTCATGTTGATTTTGCTTATTATGTTGCTTGGCTCGCTTCTTTGTATTGCAGTTAAGGCACACGAGACAACCCTTGTCAGTACCTCAGAAAATTTTCTTGATGAGAGATCCCAACTGATTGTGGAGCAAGTCTCCTCATATACTAACAAACAGAGGACTCTGCAACCAGGAGAAAACCTGAACCTTTTGCAAGCAATACAAACTCTGAACTTTTGGATTTTGTTTTTGTCTATGGCATGTGGCATGGGATCAGGACTTGCAACTGTTAATAATATCGGCCAAATAGGCGAATCCCTTGGTTACACCATCCGCGAGACAGATTCCTTGGTTTCATTGTGGAGCATTTGGAACTTCCTTGGCCGTTTCGGAGCAGGTTATGTCTCGGATCAGTTTTTACATGCAAGAGGATGGGCAAGACCTTTGTTTATGGTGATCTCCTTAGTGGTCATGAGCATTGGCCATTTGGTTATTTCTTCTGGGATGCAAGGTGCTCTATATGTTGGTTCAGTTTTGGTGGGTATCTGTTATGGCTCTCAATGGTCACTAATGCCTACAATCACTTCTGAGATATTTGGTGTGGGGAATCTGGGTAGTATATTCAACACCATTACAATAGCAAGCCCTGTGGGATCTTATATATTTTCAGTGAGAGTTGTTGGGTATATATATGACAAAGAAGCATCAGAGGGAAACAAGTGCATTGGAACTCATTGTTTTATGTTGTCTTTCCTTATAATGGCATCTGCCACTGTTTTGGGTTCTTTGGCAGCTCTAGGTTTGTTTTTCCGGACAAGAAACTATTATGGTCAGGTTATACATAGAAGAATTCAGAACGTTCTGTAA 1581 0.4421 MMDWRRLNSYVKSKWTSTVASTWIQCTSGSLYTFSIYSQTLKSTLHYNQSTLNTVSVWKDIGVNVGVISGLLYDFAARRTPNGPWLVHLLGSAQCFLGYFLIWAAVAGVMAPVPVPVVCLFMFVAAQAQSYFNTSNVVTGVHNFPDYSGTIVGIMKGFLGLSGAMLIQVYKTIFNNKPKSYLLMLALLPPINTLLLMWFVRIHNTREGDERKYLNMFSSMAVVVAAYLMTVIILENILSLPSIIYVVMLILLIMLLGSLLCIAVKAHETTLVSTSENFLDERSQLIVEQVSSYTNKQRTLQPGENLNLLQAIQTLNFWILFLSMACGMGSGLATVNNIGQIGESLGYTIRETDSLVSLWSIWNFLGRFGAGYVSDQFLHARGWARPLFMVISLVVMSIGHLVISSGMQGALYVGSVLVGICYGSQWSLMPTITSEIFGVGNLGSIFNTITIASPVGSYIFSVRVVGYIYDKEASEGNKCIGTHCFMLSFLIMASATVLGSLAALGLFFRTRNYYGQVIHRRIQNVL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30448g00003 526 Pfam Major Facilitator Superfamily 320 511 IPR011701 GO:0022857|GO:0055085
Stsc30448g00003 526 SUPERFAMILY MFS general substrate transporter 9 203 IPR036259 -
Stsc30448g00003 526 Gene3D MFS general substrate transporter like domains 184 503 IPR036259 -
Stsc30448g00003 526 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 515 - -
Stsc30448g00003 526 SUPERFAMILY MFS general substrate transporter 214 512 IPR036259 -
Stsc30448g00003 526 CDD MFS_Mch1p_like 13 499 - -
Stsc30448g00003 526 Pfam Nodulin-like 14 263 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30448g00003 Stsc-Chr30448 30982 34199 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30448g00003 11 524 Nodulin-like Gene Family AT1G74780 55.639 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30448g00003 - - gmx:100814668 792.727