Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30448g00001 ATGGCGGAGTGGTTGTTAAATCGGTGGACCGGTGCGGCCGCAGCTATAATGATCCAGTGGAGCTGCGGTGCATCGTACACCTTCAGCATCTACTCCCCTGTGCTAAAGTCCTCGCAAGGCTACGATCAATCAACGCTTGATACGGTTTCGGTGTTTAAGGATATCGGCGCCAATTTCGGCATCCTCTCCGGGCTTCTCTACACTGCCGTTACCCCCTACCGGAGTGGCGGTGAGGCCGGCTTTGAGGGGAAGTCGAGGTGGGCCTCATTGGGTGGGCCATGGGTGGTGCTGGCTGCTGGGGCGGTCCAGCTTTTCGTGGGTTTCTTGTTCATGTGGGCCGCTGTTGTTGGGCTGATTGGGACGCCGCCGGTTTGGGTAATGTGCTTCTTTGCGTGGCTTGCAGCTAACGGTCAGGCGTTCTTGAATACTACGACTGTTGTGACTGGCTTGCGGAATTTCCCTGAATATAGTGGAACCATTGTGGGCATCATGAAGGGCTTCCTTGGACTCAGTGGAGCAATCTTAATTCAACTGTATCACACATTTATTGATGGCGACCCTGCCGCATACATTCTGATGCTTGCTTGTTTACCTTCTTTCATTTGCTTACTGCTTATGTTTTTGGTGAGGATCTATGAAGTGTGTGACAACAATTACAAGAAGCATTTGAACGGTTTCTCAGTTGTCACTGTGATTATTGTTGCCTATCTCATGTTCATAATCATTTTACAAAACTTCATCAACTTATCAACTTGGGGGCGCATGCTCACATTTGTAATGCTAATGGTTCTACTAGCACTCCCCTACGGCATTGCCATTAAAGCTCAATGGGAAGAGTCACGGAACTTTGCGCACACCTTCTCGTTCGAGAGGGCCCCTTCAACAGACAACCAAAAGCTAATCACATCATCTAGTTATTCTCCGTCGGTGGATCAATCGGAATACCAAGAGCTGCCTAGTGATGCAGGGCAGGTACCATTAAATTTAGATGACATGTTGCCCCAAGAACAAGAAATGAACCTCCTGCAAGCTATGTGCACAATTGATTTTTGGATGTTGTTTGTAACCATGATATCAGGGTTGGGATCAGGGCTGGCAATGATAAATAACATGAGCCAAATTGGCGAATCACTTGGCTATAGTACAATACAGATTAATAATATGGTGTCCTTGTGGAGTATGTGGAACTTTCTTGGCCGTTTTGGAGGTGGCTATGTGTCTGATTATATGATGCACCGAAAAGGTTGGCCAAGGCCGTTGTTGATGGCAGCAACTCTGGGGACGATGATTTTCGGCCATGTCATTATAGCTGTTGGTTTCCCTGGAAACCTGTATTTGGGTCCTGTCTTGGTGGGAATCTGCTATGGTGCACATTGGTCCTTGATGCCTACAATCACTTCAGAGATTTTTGGTGTAAGGCATATGGGTACCATTTTCAACACTATTGCTGCTGCAAGTCCACTTGGTTCTTATTTACTTTCTGTGAAAGTTGTTGGATATATTTATGACAAGGAAGCTGATAAAGAAGATAATTCATGCTTTGGAATACACTGCTTCATGTCATCGTTTTTTATCCTGGCAGCTGTATCTTTTGTTGCATTTTTGGCGGGTCTTGCATTATACTTTCGGACACGAAATTTCTATAAGCTAGTTGTGCTCAAAAGATTAAAACATTCTGTGTGA 1683 0.4581 MAEWLLNRWTGAAAAIMIQWSCGASYTFSIYSPVLKSSQGYDQSTLDTVSVFKDIGANFGILSGLLYTAVTPYRSGGEAGFEGKSRWASLGGPWVVLAAGAVQLFVGFLFMWAAVVGLIGTPPVWVMCFFAWLAANGQAFLNTTTVVTGLRNFPEYSGTIVGIMKGFLGLSGAILIQLYHTFIDGDPAAYILMLACLPSFICLLLMFLVRIYEVCDNNYKKHLNGFSVVTVIIVAYLMFIIILQNFINLSTWGRMLTFVMLMVLLALPYGIAIKAQWEESRNFAHTFSFERAPSTDNQKLITSSSYSPSVDQSEYQELPSDAGQVPLNLDDMLPQEQEMNLLQAMCTIDFWMLFVTMISGLGSGLAMINNMSQIGESLGYSTIQINNMVSLWSMWNFLGRFGGGYVSDYMMHRKGWPRPLLMAATLGTMIFGHVIIAVGFPGNLYLGPVLVGICYGAHWSLMPTITSEIFGVRHMGTIFNTIAAASPLGSYLLSVKVVGYIYDKEADKEDNSCFGIHCFMSSFFILAAVSFVAFLAGLALYFRTRNFYKLVVLKRLKHSV 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30448g00001 560 Pfam Major Facilitator Superfamily 353 545 IPR011701 GO:0022857|GO:0055085
Stsc30448g00001 560 SUPERFAMILY MFS general substrate transporter 233 546 IPR036259 -
Stsc30448g00001 560 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 549 - -
Stsc30448g00001 560 ProSiteProfiles Major facilitator superfamily (MFS) profile. 348 560 IPR020846 GO:0022857
Stsc30448g00001 560 Pfam Nodulin-like 93 271 IPR010658 -
Stsc30448g00001 560 Pfam Nodulin-like 8 70 IPR010658 -
Stsc30448g00001 560 SUPERFAMILY MFS general substrate transporter 5 210 IPR036259 -
Stsc30448g00001 560 CDD MFS_Mch1p_like 8 533 - -
Stsc30448g00001 560 Gene3D MFS general substrate transporter like domains 349 557 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30448g00001 Stsc-Chr30448 13993 17794 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30448g00001 3 558 Nodulin-like Gene Family AT1G74780 55.935 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30448g00001 - - adu:107491342 1056.59