Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30443g00012 ATGGATCGGTGCCCCCGGGAACAAGGACCTCCATTACTGGCTGGCTCAGTAGTGTACGAGGCCTTCCGCATTGACCCACCTGTGCCGCTTCAGTATGGGAAAGCGAAGCAGGACATGGTTATAGAGAACCATGAAAACTGTTTCCAGGTGAAGAAAGGGGAGATGCTGTTCGGGTTCCAACCGTTTGCAACGAAGGATCCGAAGATATTTGAGAGAGCAGAGGAGTTCGTTGGGGATAGGTTCTTAGGTGAAGAAGGTGAGATGCTTCTGAAGTATGTGGTGTGGTCTAATGGGCCTGAAACTGAGTCACCGAGTGTAAATAACAAACAGTGTCCCGGTAAAGACTTTGTGGTCTTGGTTTCAAGGCTTCTGGTTGTTGAGATGTTTCTCCATTATGATACCTTTGAGGTTGAAGCCACTAAGGCAGTGTTGGGTTATGATGTTAACTTCATTTCTCTTACCAGAGCTAACTCTTCTTAG 480 0.4729 MDRCPREQGPPLLAGSVVYEAFRIDPPVPLQYGKAKQDMVIENHENCFQVKKGEMLFGFQPFATKDPKIFERAEEFVGDRFLGEEGEMLLKYVVWSNGPETESPSVNNKQCPGKDFVVLVSRLLVVEMFLHYDTFEVEATKAVLGYDVNFISLTRANSS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30443g00012 159 Pfam Cytochrome P450 16 132 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30443g00012 159 Gene3D Cytochrome P450 13 158 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30443g00012 159 PANTHER CYTOCHROME P450 26 13 133 - -
Stsc30443g00012 159 SUPERFAMILY Cytochrome P450 13 140 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30443g00012 Stsc-Chr30443 47346 47825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30443g00012 13 157 Cytochrome P450 AT5G42650 62.759 7.15e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30443g00012 K01723 - gmx:100037481 224.557