Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30442g00001 ATGTCTTTAGACCTATTTTTTATTGAAAATCTCCTATTCCAATCATCCACATTCACCGCCATCTTCATCAGCCTTCTACTATTTCTTTACACACACTCTTTCATAACAAGAAATCGGAAAGGCCTAACCAAATCATTACCATGGTCATCCCCACCAGAAGCTGGTGGTGCATGGCCTTTAATAGGGCACCTCCACCTTCTTGGTGGCGCACAGCCACCTCACGTGACGCTGGCCAAAATGGCCGAAAAGTACGGACCAATTTTCACTATACGACTTGGGGTTCACAAAACTTTGGTTGTTAGCAGCAAGGAGATGGCAAGAGAGTGCTTCACCATTAACGATAAGGCGTTTGCTAGCCGCCCTACAGGCATTGCCTTTGAGGTTCTGGGTTACAATTATTCAATGATAGGGTTCTGCTCTTACGGTCCCTATTGGCGCCATGTGCGCAAGTTGGCCACCATCGGCATCCTCTCGGCCCGCCGGACCGAGATGCTGAAGCATATCATGGAGTCGGAGGTGAAGTTCGCCATGAAAGAGAGTTATTATTTATGGCGCACGAAGAAAACTTGTTCGGAAAAGGTTACTGAGATGAAGAAATGGATAGGGGACATAACCTTGAACATCATGTTCAGAATAGTGATGGGAAAACGTTTCGGTGGTGTGGGCGACGAAGAGAACGAACGACTTCGGAAAGCAGTTAGAGAGCTTTTCGAGCTGAGTGGGTCATTCTCTATTTCAGATGCGATGCCATATTTGAGATGGTTAGATTTGGATGGCAAAGAGAAGGCAATGAAGCGTACCTTAGATGAGTTGGACTACTTCGTTCGAATTTGGCTTGAAGAACACAAGCGAAAGACGGTTTGCGATGCAGGGGAACAAAAGGATCATCACCATGCTGATTTCATGGACGCGCTTCTGTCCACCGTTGATCAAGAATTTGATGGTCGTGATCCTGATACTATAATCAAAACCACATGCCTGGCAATGATTATAGGCGGAACAGACACTACTACCGGAACAGTAACTTGGGCTCTCTCGTTACTTCTCAATAATCAAAATGTTCTAAACAAAGTGAGAGACGAATTGGACTCAAAAATTGGGAGGGTAAAGAAGGAAGTGGAGGTATCAGACTTGAACAACTTGGTATATCTCCAAGCCGTCATGAAAGAAACATTGCGCTTGTACCCTGCAGTACCACTTGGTGCTCCACATGAGTCTGTGGAAGATTGCAACATTGGTGGTTATTATATCCCTGCCGGCACACGCCTCTTGACTAACATATCAAAGATTCACCGTGATCCGATACTATACCATGATCCTTTGGAGTTTCGACCAGAGAGATTTCTTACGGTCCATAAAGATACTGACTTTAAGGGCCAACACTTCGAATTCATTCCGTTTGGTGCGGGCAGAAGAATATGTCCTGGAATCTCATTTGGCCTTCAAATGATGCAATTAATGCTCGCTAATTTGTTACTCGGGTTTGATATTGTAACTGCTGATGGAAAGCCAGTAGATATGGTTGAAGAGGTTGGGCTAACCAGTATCAAAGCTTCTCCACTCAACGTTATTCTTGCTCCGCGTCTCGGTGTAAACTAA 1599 0.4497 MSLDLFFIENLLFQSSTFTAIFISLLLFLYTHSFITRNRKGLTKSLPWSSPPEAGGAWPLIGHLHLLGGAQPPHVTLAKMAEKYGPIFTIRLGVHKTLVVSSKEMARECFTINDKAFASRPTGIAFEVLGYNYSMIGFCSYGPYWRHVRKLATIGILSARRTEMLKHIMESEVKFAMKESYYLWRTKKTCSEKVTEMKKWIGDITLNIMFRIVMGKRFGGVGDEENERLRKAVRELFELSGSFSISDAMPYLRWLDLDGKEKAMKRTLDELDYFVRIWLEEHKRKTVCDAGEQKDHHHADFMDALLSTVDQEFDGRDPDTIIKTTCLAMIIGGTDTTTGTVTWALSLLLNNQNVLNKVRDELDSKIGRVKKEVEVSDLNNLVYLQAVMKETLRLYPAVPLGAPHESVEDCNIGGYYIPAGTRLLTNISKIHRDPILYHDPLEFRPERFLTVHKDTDFKGQHFEFIPFGAGRRICPGISFGLQMMQLMLANLLLGFDIVTADGKPVDMVEEVGLTSIKASPLNVILAPRLGVN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30442g00001 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Stsc30442g00001 532 Gene3D Cytochrome P450 39 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 Pfam Cytochrome P450 54 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 PANTHER CYTOCHROME P450 82C3-RELATED 25 529 - -
Stsc30442g00001 532 SUPERFAMILY Cytochrome P450 57 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 FunFam Cytochrome P450 82C4 43 526 - -
Stsc30442g00001 532 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30442g00001 532 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30442g00001 Stsc-Chr30442 7259 10043 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30442g00001 16 529 Cytochrome P450 AT4G31940 46.125 5.30e-167 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30442g00001 - - gmx:100778017 667.922