Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30437g00004 ATGGCAGCTTCAACAATGGCACTCTCTTCTCCATCATTGGCTGGTCAAGCAATCAAGTTTTCACCCTCCAACCCTGAGCTTGGGGTTGGAAGAGTCTCCATGAGGAAAGCAACCACCAAGCAAGCTTCCTCCGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGGCCCCATCATACCTCACTGGTGAGTTCCCTGGTGACTATGGCTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACATTTGCAAGGAACCGTGAGCTTGAAGTAATCCACTGCAGGTGGGCCATGCTTGGGGCCCTGGGCTGTGTCTTCCCTGAGCTCTTGGCCCGCAATGGTGTCAAATTTGGTGAGGCCATTGTCACTGGCAAGGGCCCAATTGAGAATCTTGCTGATCATCTTGCTGACCCAGTTAACAACAATGCTTGGGCCTATGCCACAAACTTTGTCCCTGGAAAGTGA 486 0.535 MAASTMALSSPSLAGQAIKFSPSNPELGVGRVSMRKATTKQASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30437g00004 161 SUPERFAMILY Chlorophyll a-b binding protein 47 158 - -
Stsc30437g00004 161 Gene3D Chlorophyll a/b binding protein domain 126 154 - -
Stsc30437g00004 161 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 127 161 IPR001344 GO:0009765|GO:0016020
Stsc30437g00004 161 Pfam Chlorophyll A-B binding protein 64 124 IPR022796 -
Stsc30437g00004 161 Gene3D Chlorophyll a/b binding protein domain 55 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30437g00004 Stsc-Chr30437 28554 29333 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30437g00004 53 161 Chloroplast and Mitochondria Gene Families AT2G34430 52.294 9.20e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30437g00004 K08912 - qsu:112030611 244.202