Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30437g00003 ATGGCTGCTTCAACAATGGCACTCTCTTCTCCATCATTGGCTGGTCAAGCAATCAAGCTTTCACCCTCCAACCCTGAGCTTGGGGTTGGAAGAGTCTCCATGAGGAAAGCAACCACCAAGCAAGCTTCCTCCGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGGCCCCATCATACCTCACTGGTGAGTTCCCTGGTGACTATGGCTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACATTTGCAAGGAACCGTGAGCTTGAAGTAATCCACTGCAGGTGGGCCATGCTTGGGGCCCTGGGCTGTGTCTTCCCTGAGCTCTTGGCCCGCAATGGTGTCAAATTTGGTGAGGCTGTGTGGTTCAAGGCCGGGTCTCAGATATTTAGCGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCATGCTCAGAGCATCCTTGCCATTTGGGCCACCCAGGTCATCTTGATGGGCGCAGTTGAGGGCTACCGTATTGCTGGTGGGCCTCTTGGTGAGGTGACTGACCCACTGTACCCGGGAGGGAGCTTTGACCCATTGGGCCTAGCTGATGACCCAGAGGCTTTTGCTGAGCTGAAGGTGAAGGAAATCAAGAATGGCAGGCTTGCCATGTTCTCTATGTTTGGGTTCTTTGTCCAGGCCATTGTCACTGGCAAGGGCCCAATTGAGAATCTTGCTGACCACCTTGCTGACCCTGTCAACAACAATGCTTGGGCTTATGCCACAAACTTTGTCCCTGGAAAGTGA 795 0.5447 MAASTMALSSPSLAGQAIKLSPSNPELGVGRVSMRKATTKQASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30437g00003 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Stsc30437g00003 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Stsc30437g00003 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Stsc30437g00003 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Stsc30437g00003 264 FunFam Chlorophyll a-b binding protein, chloroplastic 55 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30437g00003 Stsc-Chr30437 24557 25351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30437g00003 1 264 Chloroplast and Mitochondria Gene Families AT1G29930 88.764 5.56e-173 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30437g00003 K08912 - qsu:112030611 520.39