Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30436g00002 ATGACAGGAGCAAACGAATCTGAATATGATAGAGAAGCCCCACCACTAGACTGGGATTCAAGAATGAAGATTTCAGTTGGAGTTGCCAAGGGTATTGCTCACATTCACTCTCTGGATGGAGGAACTTATGTCCATGGCAATATAAGATCATCCAATGTGCTTGTCACAAATGATCACCAAAGCTGCATATCAGACCTCTCATTGATTTATTCACTAAGTAACTCCTTCAAGCAATTTAGATACACAGGTTACCAAGAAGTCGATCACTTTTTTCGACCAAAGAAAATAGTGAAACTGACCCAAAAACATGACGTGTATTGCTTTGGTGTTCTTCTTTTCGAGATGCTGAGTAGGAGTTTGCCACCAGCAAGAACTTACTCTGATGTTATTGATGGCATTCCTGTATTTCTTGATGAAGCAATTAATGGTAATAGAGATGCCTGGAAGATGATAAAATTGGCAGAGAAATGTACGTCACAAGAAACTAATGATAGACCATCCATGGATGAGGTTGTTAGGGAAATGGAAGAAATCCTAGTCAATCCAGTCAAGGTATGA 558 0.3943 MTGANESEYDREAPPLDWDSRMKISVGVAKGIAHIHSLDGGTYVHGNIRSSNVLVTNDHQSCISDLSLIYSLSNSFKQFRYTGYQEVDHFFRPKKIVKLTQKHDVYCFGVLLFEMLSRSLPPARTYSDVIDGIPVFLDEAINGNRDAWKMIKLAEKCTSQETNDRPSMDEVVREMEEILVNPVKV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30436g00002 185 Gene3D Transferase(Phosphotransferase) domain 1 4 182 - -
Stsc30436g00002 185 SUPERFAMILY Protein kinase-like (PK-like) 14 175 IPR011009 -
Stsc30436g00002 185 Pfam Protein tyrosine and serine/threonine kinase 13 174 IPR001245 GO:0004672|GO:0006468
Stsc30436g00002 185 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30436g00002 185 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 179 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30436g00002 Stsc-Chr30436 4984 5715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30436g00002 12 181 Receptor kinase-like Gene Family AT5G58300 35.263 3.83e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc30436g00002 PK_Tyr_Ser-Thr 2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30436g00002 - - ahf:112751694 211.846