Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30436g00001 ATGAAGAGATTAAAAGATGTGATGGTAGGGAAGCAAGAATTTAAACACAAGATAAAGACTGTGCAAAGAATTTCTCAGCACCCAAATGTTCTGCCTCCTCTTGCCTGCTATTGTTCCAATGATGAAAATCTACTGATTTATGACTACATGACACAAGGCAGCTTTTCCCAGCTATTGCATGGAGCAAACGAATCTGAATATGATAGAGAAGCCCCACCACTAGACTGGGATTCAAGAATGAAGATTTCAGTTGGAGTTGCCAAGGGTATTGCTCACATTCACTCTCTGGATGGAGGAACTTATGTCCATGGCAATATAAGATCATCCAATGTGCTTGTCACAAATGATCACCAAAGCTGCATATCAGACCTCTCATTGATTTATTCACTAAGTAACTCCTTCAAGCAATTTAGATACACAGGTTACCAAGAAGTCGATCACTTTTTTCGACCAAAGAAAATAGTGAAACTGACCCAAAAACATGACGTGTATTGCTTTGGTGTTCTTCTTTTCGAGATGCTGAGTAGGAGTTTGCCACCAGCAAGAACTTACTCTGATGTTATTGATGGCATTCCTGTATTTCTTGATGAAGCAATTAATGGTAATAGAGATGCCTGGAAGATGATAAAATTGGCAGAGAAATGTACGTCACAAGAAACTAATGATAGACCATCCATGGATGAGGTTGTTAGGGAAATGGAAGAAATCCTAGTCAATCCAGTCAAGGTATGA 732 0.3921 MKRLKDVMVGKQEFKHKIKTVQRISQHPNVLPPLACYCSNDENLLIYDYMTQGSFSQLLHGANESEYDREAPPLDWDSRMKISVGVAKGIAHIHSLDGGTYVHGNIRSSNVLVTNDHQSCISDLSLIYSLSNSFKQFRYTGYQEVDHFFRPKKIVKLTQKHDVYCFGVLLFEMLSRSLPPARTYSDVIDGIPVFLDEAINGNRDAWKMIKLAEKCTSQETNDRPSMDEVVREMEEILVNPVKV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30436g00001 243 PIRSF ILK 1 242 - -
Stsc30436g00001 243 Pfam Protein tyrosine and serine/threonine kinase 11 232 IPR001245 GO:0004672|GO:0006468
Stsc30436g00001 243 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30436g00001 243 SUPERFAMILY Protein kinase-like (PK-like) 4 239 IPR011009 -
Stsc30436g00001 243 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 237 IPR046959 -
Stsc30436g00001 243 Gene3D Transferase(Phosphotransferase) domain 1 1 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30436g00001 Stsc-Chr30436 4298 5715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30436g00001 1 239 Receptor kinase-like Gene Family AT5G58300 37.786 3.06e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc30436g00001 PK_Tyr_Ser-Thr 6.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30436g00001 - - ahf:112751694 298.901