Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30434g00004 ATGGCACAAGAGGTTATGAAAACTAATGATCTCAAATTTTGTGATAGGCCTGAGCATGTTTTCTCTAAAATTATTACTTACAATGACAAAAGCATTTCCTTCTCTGCCTATGGAGACTATTGGAGGCAGGTAAAGAAGATGTGCACCATGGAGCTATTAACAACAAAACGTGTTCAATCTTTTAGGACCATAAGAGAAGAAGAGGTTTCAGAGATGGTTAAAGCAATATCTAAAAATGAAGGATCCATTGTTAATCTCGGTGACATGATTTCCTCTATGACATACGGTATAACGTCAAGGGCAATTTTTGGTACAAAGAAAAGAAACCAAAACCATGAAGTGTATGTGTCAGCAATTGAGGAATCAGTGCAGTTAGCCGCAACAACTACAATTGCTAATCTCTATCCTTCAATTGGGGTGCTTCAAATGCTTAGCAGGACCAAGGCTAGGTTTGAAGAACTCCATAGAGAGACTGATAGAATCATGCAAGATATTGTGGATGATCACAAGCACAGAAAAAGGGATGATGACCACTATGAAGAAGTTGATGATTTTGTTGATGTTCTTCTCAAGTTTCAACATGGAAAGGATTTTGAATATGAATTGACTGATGATCACATTAAAGCCCTCATCCAGGACATGTTCGTTGGTGGTGGAGAAACATCTTCAGTGATTGTGGAATGGGCAATGTCAGAACTGATTAAGAATCTAAAAGTGCTGGAAAGAGCACAAGATGAAGTTAGAAGGGTTTATGTTAACAAAGGGTATGTGGATGAATCAGAGTTACACCAATTGACATACCTAAAATGCATCATCAAAGAAACCCTAAGACTTCACCCATTTTTTCCACTCTTAGTTCCAAGGGAAAATAGGGAAGCATGCCAAGTAAATGGTTATGAAATACCACCTAAGTCTAAGGTTATTATCAATGCTTGGGCAATTGCAAGAGATCCAAGGTTTTGGATTGATGATGCTGAGAGTTTCAAACCTGAGAGGTTTCTTGATAGCTCTATTGATTATAGAGGCTCACACTTTGAATTCCTTCCATTTGGTGCTGGAAGAAGAATGTGTCCTGGGATTGCATTTGCTACACCAAACATGGAGTTGCCACTTGCTAAATTGCTTTACCATTTTGATTGGAAGCTTCCCAATGGAATCAAGAATGAAGAACTTGAAATGATTGAGTCATTTGGGATCACTATTAGAAGACAAAACAAATTATGTTTGATTCCCATTATTGTTCATAAACCTTAA 1254 0.3764 MAQEVMKTNDLKFCDRPEHVFSKIITYNDKSISFSAYGDYWRQVKKMCTMELLTTKRVQSFRTIREEEVSEMVKAISKNEGSIVNLGDMISSMTYGITSRAIFGTKKRNQNHEVYVSAIEESVQLAATTTIANLYPSIGVLQMLSRTKARFEELHRETDRIMQDIVDDHKHRKRDDDHYEEVDDFVDVLLKFQHGKDFEYELTDDHIKALIQDMFVGGGETSSVIVEWAMSELIKNLKVLERAQDEVRRVYVNKGYVDESELHQLTYLKCIIKETLRLHPFFPLLVPRENREACQVNGYEIPPKSKVIINAWAIARDPRFWIDDAESFKPERFLDSSIDYRGSHFEFLPFGAGRRMCPGIAFATPNMELPLAKLLYHFDWKLPNGIKNEELEMIESFGITIRRQNKLCLIPIIVHKP 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30434g00004 417 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 350 359 IPR017972 GO:0005506|GO:0016705
Stsc30434g00004 417 Gene3D Cytochrome P450 1 410 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 SUPERFAMILY Cytochrome P450 2 409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 Coils Coil 230 250 - -
Stsc30434g00004 417 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 PRINTS P450 superfamily signature 348 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 PRINTS P450 superfamily signature 217 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 PRINTS P450 superfamily signature 270 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 PRINTS E-class P450 group I signature 311 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 PRINTS E-class P450 group I signature 226 252 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 PRINTS E-class P450 group I signature 269 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 PRINTS E-class P450 group I signature 347 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 PRINTS E-class P450 group I signature 357 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 PRINTS E-class P450 group I signature 1 18 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 PRINTS E-class P450 group I signature 206 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 PANTHER OS08G0105600 PROTEIN 1 413 - -
Stsc30434g00004 417 Pfam Cytochrome P450 1 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00004 417 FunFam Cytochrome P450 99A2 1 412 - -
Stsc30434g00004 417 CDD CYP71-like 1 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30434g00004 Stsc-Chr30434 16144 18549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30434g00004 2 411 Cytochrome P450 AT3G26300 38.095 1.31e-106 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30434g00004 - - adu:107496273 551.206