Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30434g00003 ATGTACAGCCTTGTTGGGTCAATGCCCCATGAAGCCCTAAGAAACTTAGCATCAAAATATGGACCCTTAATGCACCTTAAACTAGGAGAAATCTCCAACATCATAGTTTCTTCACCTGAAATGGCACAAGAGATTATGAAAACTCAAGATCTCAACTTTTGTGATAGGCCAAACCTTCTCTTTACAAGAATCTGGGCTTACAATCGCACAAGCATTGCCTTTGGAAACTATGGAGACTATTGGAGGCATGTACGGAAGATATGCACCATGGAGTTATTAACAGCAAAGCGTGTTCAATCCTTTAGGCATATAAGAGAAAAAGAGGTTTCAGAGTTGGTCAAAGCAGTATCTGAAAGTGAAGGCTCCATTTTTAATCTCACTCAGAAGATTTTCTCAATGATCTATGGAATAGCAGCTAGAGCAGCATTTGTTGACGTTCTTCTCAAGTTTCAAGAAAAAGACTCTGAATACCCCTTAACTGATGACAACATCAAAGCAGTCATCCAGGAAATGTTTATTGGTGGTGGAGAAACAACCTCATCGGTTGTGGACTGGGCAATGGCTGAAATGATAAAGAAACCAAAAGTAATGGAAAGAGCACAAGCTGAAGTTAGAAGGGTTTATGTTCCAAGAGAGAACAAAGAACCATGCCTAATCAAGAGGTACCAAATTCCAGCCAATTCTAGAATTGTTACCAATGCTTGGGCAATTGGAAGAGATCCAAAGTATTGGGTTGATGCTGAGAGTTTTATGCCAGAAAGATTTCTTGATAGTTCTATTGATTACAGAGGCATAAACTTTGAACTTATTCCTTTCGGTGCTGGAAGAAGAATCTGTCCCGGAATTACATTTGCTACACCAATCATGGAGTTGCCACTTGCTCAATTTCTTTACTATTTTGATTGGAAGCTTCCCAATGGAATGAATAATGAGGAACTTGATATGACTGAATTGTATGGGTTGACTATTAGAAGAAGAAATGATCTCTGCTTGATTCCCATTATTCATCATCAACCTTAA 1020 0.3882 MYSLVGSMPHEALRNLASKYGPLMHLKLGEISNIIVSSPEMAQEIMKTQDLNFCDRPNLLFTRIWAYNRTSIAFGNYGDYWRHVRKICTMELLTAKRVQSFRHIREKEVSELVKAVSESEGSIFNLTQKIFSMIYGIAARAAFVDVLLKFQEKDSEYPLTDDNIKAVIQEMFIGGGETTSSVVDWAMAEMIKKPKVMERAQAEVRRVYVPRENKEPCLIKRYQIPANSRIVTNAWAIGRDPKYWVDAESFMPERFLDSSIDYRGINFELIPFGAGRRICPGITFATPIMELPLAQFLYYFDWKLPNGMNNEELDMTELYGLTIRRRNDLCLIPIIHHQP 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30434g00003 339 Gene3D Cytochrome P450 142 208 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 PRINTS E-class P450 group I signature 163 180 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 PRINTS E-class P450 group I signature 17 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 PRINTS E-class P450 group I signature 41 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 PRINTS E-class P450 group I signature 233 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 PRINTS E-class P450 group I signature 183 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 PRINTS E-class P450 group I signature 279 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 PRINTS E-class P450 group I signature 269 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 PRINTS P450 superfamily signature 174 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 PRINTS P450 superfamily signature 270 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 Gene3D Cytochrome P450 1 141 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 Pfam Cytochrome P450 209 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 Pfam Cytochrome P450 7 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 Pfam Cytochrome P450 140 207 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 PANTHER OS08G0105600 PROTEIN 143 207 - -
Stsc30434g00003 339 SUPERFAMILY Cytochrome P450 5 332 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 Gene3D Cytochrome P450 209 328 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00003 339 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 272 281 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30434g00003 Stsc-Chr30434 5394 8087 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30434g00003 5 334 Cytochrome P450 AT3G26180 32.603 2.01e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30434g00003 - - twl:119985419 335.88