Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30434g00001 GACATGTTTGTTGGTGGTGGTGAAACATCGTCAGCGGTTGTGGATTGGGCAATGGCCGAAATGATAAAGAAACCAAAAGTGATGGAAAGAGCACAAGCTGAAGTTAAAAGGGTTTATGGTAACAAAGGATATGTGGATGAATCAGAATTGCACCAATTGATATACCTTAAGTGTATCATCAAGGAAACCTTAAGGTTACATCCATCTGTGCCATTGTTAGTTCCAAGAGAGAACAAAGAACCATGCCAAATCAAAGGGTACCAAATTCCAGCCAATTCTAGAATTATTACCAATGCTTGGGCCATTGGAAGAGATCCAAGGTATTGGGTTGATGCTGAGAGTTTTATGCCAGAGAGATTTCTTGATAGTTCAATTGATTACAGAGGCATGAATTTCGAGTTTATTCCATTCGGTGCTGGAAGAAGAATGTGTCCTGGAATTGCATTTGCTACGCCAAACATGGAGTTGCCACTTGCTAAATTGCTTTATCATTTTGATTGGAAGCTTCCCCATGGAATGAAGAATGAAGAACTTGACATGACTGAATTGTTTGGGACCACTATGAGAAGAAGAAATGATCTCTGTTTGATTCCCATTACTACTCATCAACCTTAA 615 0.3951 DMFVGGGETSSAVVDWAMAEMIKKPKVMERAQAEVKRVYGNKGYVDESELHQLIYLKCIIKETLRLHPSVPLLVPRENKEPCQIKGYQIPANSRIITNAWAIGRDPRYWVDAESFMPERFLDSSIDYRGMNFEFIPFGAGRRMCPGIAFATPNMELPLAKLLYHFDWKLPHGMKNEELDMTELFGTTMRRRNDLCLIPITTHQP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30434g00001 204 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 137 146 IPR017972 GO:0005506|GO:0016705
Stsc30434g00001 204 PANTHER OS08G0105600 PROTEIN 1 201 - -
Stsc30434g00001 204 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00001 204 PRINTS P450 superfamily signature 135 144 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00001 204 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00001 204 PRINTS P450 superfamily signature 144 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00001 204 Pfam Cytochrome P450 1 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00001 204 Gene3D Cytochrome P450 1 197 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00001 204 SUPERFAMILY Cytochrome P450 1 197 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00001 204 FunFam Predicted protein 3 196 - -
Stsc30434g00001 204 PRINTS E-class P450 group I signature 98 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00001 204 PRINTS E-class P450 group I signature 14 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00001 204 PRINTS E-class P450 group I signature 144 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00001 204 PRINTS E-class P450 group I signature 134 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30434g00001 204 PRINTS E-class P450 group I signature 57 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30434g00001 Stsc-Chr30434 1391 2005 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30434g00001 1 199 Cytochrome P450 AT2G45550 48.744 8.50e-73 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30434g00001 - - adu:107496273 368.237