Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30430g00005 ATGTTTGACCAAATCATGGATGCATCAAAAGGAAAGAAAATCGTCATGTTCCTCGACTATGATGGCACTTTGTCACCCATAGTCGACGACCCCGATCGCGCTTTCATGTCCGATTCGATGAGAAAGACTGTGAGGAAGCTTGCAAGGTGTTTTCCTACTGCCATAGTTACGGGCAGATGCAGAGACAAGGTATATAACTTTGTTCGCTTGGCGGAGCTATACTATGCTGGTAGTCATGGCATGGATATAAAAGGCCCAACAAGAACCTCCAAATATAACAAAGACACCAAGGCAGACCCTGTTCTTTTTCAACCTGCCGCTGAATTTCTTCCTCTCATAGATGAGGTGTACCAAGAATTGGTTGAGAAAACGAAATCAACTCCCGGTGCCAGGGTGGAGAACAACAAGTTCTGTGTCTCTGTCCATTTTCGTTGTGTTGAGGAGAAGGAATGGGGTGAACTGGCACAACAAGTGAGATCAGTGTTAAAGAAGTACCCGAAGCTTCGTCTTAGCCAAGGGAGGAAGGTATTGGAGATTCGTCCTACTATTAAATGGGACAAAGGGAAGGCCCTCGAATTTTTGTTAGAGTCTCTCGGATTTGCCAACTGTAGTGATGTGTTTCCCGTTTACATTGGGGATGATAGAACCGATGAAGATGCATTCAAGAAGTTGAGAGACAGAGGACAAGGTTTAGGAATTCTTGTCTCGAAATTTCCCAAGGACACTAATGCATCCTACTCTTTGCAAGAACCTACTGAGGTTATGGACTTTCTTCAACGTTTAGTGGATTGGAAGAAAGAATCCCTCCGAGCACGTTCCAGGGTGTAA 828 0.4469 MFDQIMDASKGKKIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKLARCFPTAIVTGRCRDKVYNFVRLAELYYAGSHGMDIKGPTRTSKYNKDTKADPVLFQPAAEFLPLIDEVYQELVEKTKSTPGARVENNKFCVSVHFRCVEEKEWGELAQQVRSVLKKYPKLRLSQGRKVLEIRPTIKWDKGKALEFLLESLGFANCSDVFPVYIGDDRTDEDAFKKLRDRGQGLGILVSKFPKDTNASYSLQEPTEVMDFLQRLVDWKKESLRARSRV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30430g00005 275 NCBIfam HAD-IIB family hydrolase 16 227 IPR006379 -
Stsc30430g00005 275 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 270 IPR044651 GO:0004805|GO:0005992
Stsc30430g00005 275 Gene3D - 14 102 IPR023214 -
Stsc30430g00005 275 Gene3D - 112 274 IPR023214 -
Stsc30430g00005 275 FunFam Trehalose 6-phosphate phosphatase 112 271 - -
Stsc30430g00005 275 FunFam Trehalose 6-phosphate phosphatase 14 101 - -
Stsc30430g00005 275 SUPERFAMILY HAD-like 15 264 IPR036412 -
Stsc30430g00005 275 Pfam Trehalose-phosphatase 17 251 IPR003337 GO:0003824|GO:0005992
Stsc30430g00005 275 CDD HAD_TPP 15 255 - -
Stsc30430g00005 275 NCBIfam trehalose-phosphatase 11 262 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30430g00005 Stsc-Chr30430 19684 22003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30430g00005 10 263 Trehalose Biosynthesis Gene Families AT1G60140 24.632 4.28e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30430g00005 K01087 - gmx:100815357 502.671