Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30428g00005 ATGATGGGAAGCTCAAGAGAAATTGCCATTGGACCAGTTGCAGTGGTGTCCATGCTTCTATCTACTCTTGTTCAGAAAGTGGAAGACCCTGTTGCTAATCCTATTGCCTATAGAAATTTTGTGTTTACCGTTACCTTCTTTGCTGGAATCTTTCAAGCCGCATTCGGAATCTTCAGAATGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCCTTAGTCGGATTCATGGCCGGCGCGGCCATCGTCATCGGGCTTCAGCAGCTAAAAGGATTGCTTGGGATTACTCACTTTACCACCAAAACAGACGCAGTATCGGTGTTGGCATCTGTTTATAAATCGCTGCATCATCAAATTACTTCTGGAGAAAAATGGTGTCCTCTCAATTTTGTGCTGGGGTGCTCATTCCTTATTTTCATTCTGATTACCCGGTTTATTGGAAGAAGAAACAGGAAGCTTTTCTGGTTGCCTGCAATTTCTCCTCTTCTATCAGTTATAGTTTCAACACTAATTGTATATTTGTCAAAAGCTGATAAGCAAGGAGTTAACATAATAAAGCATGTCAAAGGAGGCCTTAATCCAAGTTCACTTCACCAGTTGCAATTTCATGGTCAAAATGTTGGGGAAGCTGCTAAAATTGGATTAATTTGTGCCATCATAGCACTCACTGAAGCAGTAGCTGTTGGTCGATCTTTTGCCTCGGTTAAGGGATACCACCTTGATGGGAACAAAGAAATGTTATCAATGGGAGTCATAAACATTGCAGGATCTTTAACTTCTTGCTATATAGCAACAGGTTCATTTTCAAGAACAGCAGTGAATTTCAGTGCAGGATGCCAAACAGCAGTGTCAAATATAGTGATGGCAATAACAGTGTTTGTGTGCTTGCAACTGTTTACAAGGCTGTTATACTACACACCTGTGGCAATACTTGCTTCTATCATACTCTCTGCACTCCCTGGATTAATTGACATATCTGAGGCTTTCTATATCTGGAAGGTTGACAAGTTTGACTTTCTTGCTTCTCTTGGTGCCTTCCTTGGTGTCTTGTTTGCATCAGTAGAGATTGGTCTTCTTGTTGCAGTAACAATCTCATTTGCAAAGATACTAATACAATCAATAAGACCAGGGGTAGAAGTTCTAGGGAGGGTTCCAAGCACTGAAGCCTTTTGTGATGTAACACAATACCCTATGGCCATAAGCACCCCTGGAATCATTGTCATTCGCATCAGCTCTGGCTCATTTTGCTTTGCAAATGCTAATTTTGTCAGAGAAAGAATTTTGAAGTGGGTCACGGGAGATGATGAGTTTAAAGACACTGCCAAGGGAAAGGTCAAAGCAGTGATCCTCGACATGGCAAATCTAATGAATGTTGATACTTCCGGAATTCTGGCATTGGAGGAGCTACACAAGAGATTGCAGTCACGTGGCATTGAATTAGCTATGGTGAACCCAAGGTGGCTAGTAATTCATAAACTCAAACTTGCACACTTTGTGGACAAAATCGGAAAGGAATGGATCTTCCTCACTGTTGGAGAAGCCGTGGATGCATGTCTCAATTATAAATTTTCTAGTGCTTGA 1578 0.4144 MMGSSREIAIGPVAVVSMLLSTLVQKVEDPVANPIAYRNFVFTVTFFAGIFQAAFGIFRMGFLVDFLSHAALVGFMAGAAIVIGLQQLKGLLGITHFTTKTDAVSVLASVYKSLHHQITSGEKWCPLNFVLGCSFLIFILITRFIGRRNRKLFWLPAISPLLSVIVSTLIVYLSKADKQGVNIIKHVKGGLNPSSLHQLQFHGQNVGEAAKIGLICAIIALTEAVAVGRSFASVKGYHLDGNKEMLSMGVINIAGSLTSCYIATGSFSRTAVNFSAGCQTAVSNIVMAITVFVCLQLFTRLLYYTPVAILASIILSALPGLIDISEAFYIWKVDKFDFLASLGAFLGVLFASVEIGLLVAVTISFAKILIQSIRPGVEVLGRVPSTEAFCDVTQYPMAISTPGIIVIRISSGSFCFANANFVRERILKWVTGDDEFKDTAKGKVKAVILDMANLMNVDTSGILALEELHKRLQSRGIELAMVNPRWLVIHKLKLAHFVDKIGKEWIFLTVGEAVDACLNYKFSSA 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30428g00005 525 Pfam STAS domain 395 513 IPR002645 -
Stsc30428g00005 525 PANTHER SULFATE TRANSPORTER 2 517 IPR001902 GO:0016020|GO:0055085
Stsc30428g00005 525 SUPERFAMILY SpoIIaa-like 401 517 IPR036513 -
Stsc30428g00005 525 FunFam Sulfate transporter 31 374 520 - -
Stsc30428g00005 525 Pfam Sulfate permease family 1 341 IPR011547 GO:0016020
Stsc30428g00005 525 CDD STAS_SulP_like_sulfate_transporter 395 510 - -
Stsc30428g00005 525 NCBIfam sulfate permease 1 513 IPR001902 GO:0016020|GO:0055085
Stsc30428g00005 525 Gene3D STAS domain 374 520 IPR036513 -
Stsc30428g00005 525 ProSiteProfiles STAS domain profile. 411 517 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30428g00005 Stsc-Chr30428 31050 38190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30428g00005 1 521 Inorganic Solute Cotransporters AT5G10180 65.267 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30428g00005 K17469 - gmx:100776591 899.042