Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30427g00012 ATGATATCTGGAACTAGCATGTCTGCACCACATATAGCTGGCATCGCTGCTCTTATAAAGCAGAAGCATCCACATTGGAGCCCTGCTGCCATTAAATCAGCCTTGATGACAACAACATCAACATTAGATAGAGCAGGGAATCCTCTTCTAGCTCAACAAGCTTCTGAAACAGGAACTACAAAGCTTGTCAAAGCTACTCCTTTTGATTATGGAAGTGGACATGTTGATCCAAGAGCTGCCTTGGATCCTGGGCTCATCTTTGATGCAGGATATGAGGATTATCTAGGCTTCTTGTGTACAACACCAGGCATTGATGTTCATGAGATAAGGAACTACACTCACAAACCATGTAACAATACCATGGGCAAACCATCAAACTTAAACACCCCATCAATAACAATTTCACATCTCGTGAGAACTCAAACCGTCACTCGAACCGTCACGAATGTTGCCGAGGAAGAAACCTATGTGATCACGGCCAGAATGGATCCAGCTGTTGCCGTTGATGTCAACCCTCCTGCAATGACCATCAGAGCAGGCGCATCACGCAAGTTCTCCGTGACACTCACCGTTCGCAGAGTGACCGGGATCTATAGTTTCGGAGAGGTTCTAATGAAAGGCAGCAGAGGTCACAAGGTAAGGATCCCAGTTCTGGCGAATGGATACCCTCGATAG 675 0.4622 MISGTSMSAPHIAGIAALIKQKHPHWSPAAIKSALMTTTSTLDRAGNPLLAQQASETGTTKLVKATPFDYGSGHVDPRAALDPGLIFDAGYEDYLGFLCTTPGIDVHEIRNYTHKPCNNTMGKPSNLNTPSITISHLVRTQTVTRTVTNVAEEETYVITARMDPAVAVDVNPPAMTIRAGASRKFSVTLTVRRVTGIYSFGEVLMKGSRGHKVRIPVLANGYPR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30427g00012 224 ProSitePatterns Serine proteases, subtilase family, serine active site. 4 14 IPR023828 -
Stsc30427g00012 224 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 217 IPR045051 -
Stsc30427g00012 224 SUPERFAMILY Subtilisin-like 2 85 IPR036852 GO:0004252|GO:0006508
Stsc30427g00012 224 ProSiteProfiles Serine proteases, subtilase domain profile. 1 81 - -
Stsc30427g00012 224 Pfam Fibronectin type-III domain 126 218 IPR041469 -
Stsc30427g00012 224 Gene3D - 98 221 - -
Stsc30427g00012 224 Pfam Subtilase family 2 46 IPR000209 GO:0006508|GO:0008236
Stsc30427g00012 224 Gene3D Peptidase S8/S53 domain 1 94 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30427g00012 Stsc-Chr30427 52127 53383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30427g00012 1 224 Subtilisin-like Serine Gene Family AT4G30020 77.778 1.80e-121 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30427g00012 - - tpra:123910073 394.43