Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30427g00011 ATGAGATTCTTGGAGTTTGGGTGTTTGATTACAGTTCTATGTGGTCTTCTTGTGTCTCTGAAAGCTGAGATTTACATTGTTACTGTTGAAGGTGAACCTGTCATTAGTTATGCAGGTGGAATTGATGGCTTTGAAGCTACTGCTGTTGAATCTGATGAGAAGATTGATACCAATAGTGAATTGGTTACTTCATATGCTCATCATCTTGAGAAAAAACATGATATGCTTCTGGGGATGCTGTTTGAGCCTGGAACATACAAGAAACTCTATAGCTATCGGCATCTGATAAATGGGTTTGCTGTTCATATTTCCCCGGAACAGGCAGAAACTCTAAGACATGCACCCGGAGTGAAATCTATTGTTGGAGCACAACATTTTGCCCAAGCTGCAATAGCTGCTGGGGCATTTAACCCTTCAATTGATTTCGCATCTCCTCTAGATGGAGATGGACATGGAAGTCATACAGCCTCTATAGCTGCTGGAAATAATGGAATTCCTGTGAGGATGCATGGCCATGAATTTGGTAGAGCTAGTGGAATGGCTCCTCGTGCCAGAATTGCTGTGTACAAGGCACTCTACAGATTATTTGGAGGATTTGTGGCAGACGTAGTTGCTGCAATCGATCAGGCTGTATACGATGGAGTGGATATACTCAGCCTTTCAGTTGGACCGAATAGTCCTCCAGCAGCCACCAAAACCACATTCTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGCAATGGTGGTCCTTTTCCTAAAACAATGGTTTCATATAGTCCATGGATAGCCTCTGTGGCAGCTGCAATTGATGATCGTAGATACAAAAACCATTTGACCCTTGGAAATGGAAAAGTCTTAGCTGGAATCGGGTTATCACCTGCTACACATTTAAACGAAACATACACACTGGTTGCTGCAAATGATGTGCTGCTGGATTCTTCAGTGATGAAGTTCACCCCCACAGACTGCCAGAGACCAGAACTTCTAAACAAGAGACTGATACAGGGAAATATTCTTCTATGTGGATATTCTTTCAACTTTGTTTCTGGTTCAGCATCAATAAAGAAAGTCTCAGAAACAGCAAAGGCCCTTGGTGCAGTTGGATTTGTTCTTTGTGTTGAAAACGCTTCCCCAGAAACAAGATTTGACCCAGTTCCTGTTGGTGTTCCTGGGATTGTCATTGTTGATGTCAGGAACTCAAAGGTGAGGGATTTGCCATGA 1257 0.4304 MRFLEFGCLITVLCGLLVSLKAEIYIVTVEGEPVISYAGGIDGFEATAVESDEKIDTNSELVTSYAHHLEKKHDMLLGMLFEPGTYKKLYSYRHLINGFAVHISPEQAETLRHAPGVKSIVGAQHFAQAAIAAGAFNPSIDFASPLDGDGHGSHTASIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVYDGVDILSLSVGPNSPPAATKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTMVSYSPWIASVAAAIDDRRYKNHLTLGNGKVLAGIGLSPATHLNETYTLVAANDVLLDSSVMKFTPTDCQRPELLNKRLIQGNILLCGYSFNFVSGSASIKKVSETAKALGAVGFVLCVENASPETRFDPVPVGVPGIVIVDVRNSKVRDLP 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30427g00011 418 SUPERFAMILY Subtilisin-like 127 326 IPR036852 GO:0004252|GO:0006508
Stsc30427g00011 418 Pfam Subtilase family 143 267 IPR000209 GO:0006508|GO:0008236
Stsc30427g00011 418 Gene3D Peptidase S8/S53 domain 118 282 IPR036852 GO:0004252|GO:0006508
Stsc30427g00011 418 CDD PA_subtilisin_like 290 406 - -
Stsc30427g00011 418 ProSiteProfiles Serine proteases, subtilase domain profile. 1 418 - -
Stsc30427g00011 418 Gene3D - 283 405 - -
Stsc30427g00011 418 Pfam Peptidase inhibitor I9 25 121 IPR010259 -
Stsc30427g00011 418 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 119 413 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30427g00011 Stsc-Chr30427 49006 52296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30427g00011 120 417 Subtilisin-like Serine Gene Family AT4G30020 83.221 3.25e-171 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30427g00011 - - gmx:100787619 523.857