Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30426g00021 ACTCCAGGAACAGTTAAATTTGCTGCCTTTCATGTTCTCTCACTTGAAGGTAGCAAGGGTCTGACAGTACTTGAGCTAGCAGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACTACCAGCAAGACACCTGAAGCATCAATCTCTGTTGCTTTGACAAGAGACACTAAGCTGTTTGAAAGAATAGCTCCATCAACCTATCGTGTGCGTACTGCATTTAGAAAGGATCCGGACGATGCCGAGTCCATTCTGTCTGCGGCGAGAAAGAAAATTCAGATATTTGAGAATGGGTTTCCAGCTGGTGAAGATGCTGATGATGTTGAAAGAGAAGAGTCAGAAAGTGATGAAGTTGACGAGGATCCGGATGCTGATGATCTAGTAAATCCTTCAAGTGCAGATCCAGTCTCTGAACATTTTGATGAACCAAATGTTTCCACACCAAATGGAAAAGAAAATTTGGACAGTGATGTAAAACTTGATCAAAATGAGTTTGAGCCAGATCTGCCTTGTTTTCCTGAGGATGGTTACAAGGAAGCTGATTGTCCTGGCTCTGTCATTGAACAACGTGTTGCTTGTGAAGATTTGAATACTGGAAATCTTGATCAAGATAATATGGAAATTGATGAAAGTAATTATGGAGAATCCTGGGTGCAAGGACTTGCTGAAGGAGAGTATTCTGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTAGTTGCATTGATTGGTGTGGCAAATGAAGGAAATTCCATTCGTGTTGTTCTAGAGGATCGTCTGGAAGCTGCAAATTCTCTGAAGAAGCAGATGTGGGCCGAAGCACAGATAGATAAAGTTCGTCTAAAAGACGATACTATTAACAAACCAGATATTCCATTACTTATTGCCAACAAAGTTGAAACATATGAGACATATCCTGCTGCTGTGGAAGGCAGTCAAAGTCCAATGCTTGACATTAATATTAATAGTGTTAATAATGAAACATCGCCTGCCACTGCAGAAAACCAAAAGCCAGCACCTGCTGCACAGAGCTTGCATGGTGAAAAGTCCTCCCTAATTCAAGATTTGTGCACAGGCACAGGTCCAGATCACCCTCAGTTGCCAGTACCTCCACAATATTCAAAAAGATCACGTTCACAGTTGAAATCTTATATTGCTCACATAGCAGAGGAGATGTGTATCTACAGGTCTTTACCCCTTGGTCAAGATCGCAGACGTAATCGATATTGGCAGTTTGTTGCTTCTGCTTCTAGTTATGATCCTGGTTCTGGTAGGATCTTTGTTGAATATCATGATGGCCATTGGGGTCTTATTGATTCTGAAGAGGCCTTTGATATTCTTTTGGCAGCACTGGATTCAAGGGGGATCAGGGAATCTCATCTGCGCTTGATGTTGAAAAGGATTGAGAAGTACTTTAAAGAAAATGTTCGAAGGAATACACAATGTGCCAGTGCCATAATAGGGAGCAAAGATAAATTTTCGATCAAAAGTGAAGATAATAATGGACCATATTCAACACCCGATCGCCATGTTGGATCTGACAGTCCTAGCAGTACTCTTCATAGCTTGAACTCTGACAAATTAGAAACCTCATCATCCTTCAACATTGAGCTTGGAGAAAGTGAGAGTGAGAAGAAAGCTGCCGTACAAAGGTATCAAGATTTTGAGAAGTGGATGTGGAAAGAGTGCCATAATTCATCAATACTATGTGCAACAAAATATGGGAAAAAGAGATGCAAACCTCAGGTGGACATTTGTGACCTCTGTCTCCATCCTTATTTTGTTGAAGACTCCCACTGTAAATCCTGCCACAGGACTTTCACTACAAATAATGGATTTAATTTTGCTAAGCATGCATTTCAATGTGGAGATAAGTTACCTAAAAATGTTTCTATGGAATCTTCTCTTCCCCTGCGGATAAGATTGTTTAAGGTGTTGTTAGCTTGTATTGAGGCATCAGTTCTCCCTGAAGCATTTGGAACAATTTGGACAAATGATGCTAGGAAGCATTGGGGTGTGAAGTTAAGCAGATCATCCTCTGTTGAGGAGCTTTTACAGATATTGGCCTTATTTGAGAAAGCTCTACAGCGAGATTTTCTGTCATCAAACTTCTCTACAACAGATGAACTATTGGGACTGGGCAACATGGGTAGTAGTGCTTCACTTGCTTCCACTGATCCTGAATCAGTAGCTGTACTTCCATGGGTTCCACAAACTACTGCAGCATTGTCTCTCAGGCTTTTTGAGATTGATTCATCTATCAATTATGTACATCTTGAGAGACCTGAGCCACGCAAGGAGAAAGAAGCGAGAGAGTTCATCAAACTTCCCTCACGGTATACTTCCTTCAAATGCAATAGGGAGGTTGAACCAGCAGAGTTAGGGCATGGTGATTTCATTAAAGATAAATCTGCTTCTAAGAAAATTGTACGAAGTGGTATTAAGCGAGGACGAGGGTCTAATGATCAAGGACGGGTTAAAAAGATGTCTAAGAGAATGTACAGTTCCAAACGAGATACTGGCCGCCGAAATGTAAAGGTCAATGAGAATCTAAGTGACAAGCTAAAACAGCAGGGACGAGTACTACAAGGATCGGCCGGTGGTCGTGGTCGCCGAACAGTAAGGAAACGGAGAGTGGAAAAGAGAGCTGTTGAAGATTTGTTGCTGGGCCATACTGCAGCGAGCCATAGCCCCAATATTGATAGAGAACCATTGAGAAGATTTGATGAGGAATGGGATGGTGAAAGGGCAAGTCCCATGACTCCCATCCACCTTGAAATTGATGACAATAGCAACAGTGCTGAAGAGGTGGAATCTGATGACAACGGCCAAGCAGTGGAATATGATCAAGGTAACTGGGAGGTGGGTTATAATGGCGTTCCAGCCAACAGATGGAGTAGTGGCTTTGTTGGAATGAGTGATGATGAAGCGGATGCTTTTGAAGATGACAATGACAACAACAATGACAATGGCATTGAAGAGAACGAAGAAGAGGAGGATTCAGAAGCAGATGTTATGAGTGAGGGTTCAGATGGCATGGCAAATAGGGTCATAAATGAAGAAGTCTCAGACTCATCTGAATCTGAAGATTCTTATGATTAG 3096 0.4196 TPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYRVRTAFRKDPDDAESILSAARKKIQIFENGFPAGEDADDVEREESESDEVDEDPDADDLVNPSSADPVSEHFDEPNVSTPNGKENLDSDVKLDQNEFEPDLPCFPEDGYKEADCPGSVIEQRVACEDLNTGNLDQDNMEIDESNYGESWVQGLAEGEYSDLSVEERLNALVALIGVANEGNSIRVVLEDRLEAANSLKKQMWAEAQIDKVRLKDDTINKPDIPLLIANKVETYETYPAAVEGSQSPMLDININSVNNETSPATAENQKPAPAAQSLHGEKSSLIQDLCTGTGPDHPQLPVPPQYSKRSRSQLKSYIAHIAEEMCIYRSLPLGQDRRRNRYWQFVASASSYDPGSGRIFVEYHDGHWGLIDSEEAFDILLAALDSRGIRESHLRLMLKRIEKYFKENVRRNTQCASAIIGSKDKFSIKSEDNNGPYSTPDRHVGSDSPSSTLHSLNSDKLETSSSFNIELGESESEKKAAVQRYQDFEKWMWKECHNSSILCATKYGKKRCKPQVDICDLCLHPYFVEDSHCKSCHRTFTTNNGFNFAKHAFQCGDKLPKNVSMESSLPLRIRLFKVLLACIEASVLPEAFGTIWTNDARKHWGVKLSRSSSVEELLQILALFEKALQRDFLSSNFSTTDELLGLGNMGSSASLASTDPESVAVLPWVPQTTAALSLRLFEIDSSINYVHLERPEPRKEKEAREFIKLPSRYTSFKCNREVEPAELGHGDFIKDKSASKKIVRSGIKRGRGSNDQGRVKKMSKRMYSSKRDTGRRNVKVNENLSDKLKQQGRVLQGSAGGRGRRTVRKRRVEKRAVEDLLLGHTAASHSPNIDREPLRRFDEEWDGERASPMTPIHLEIDDNSNSAEEVESDDNGQAVEYDQGNWEVGYNGVPANRWSSGFVGMSDDEADAFEDDNDNNNDNGIEENEEEEDSEADVMSEGSDGMANRVINEEVSDSSESEDSYD 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30426g00021 1031 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 394 466 IPR028941 -
Stsc30426g00021 1031 MobiDBLite consensus disorder prediction 495 523 - -
Stsc30426g00021 1031 Pfam HB1, ASXL, restriction endonuclease HTH domain 3 71 IPR007759 GO:0006355
Stsc30426g00021 1031 MobiDBLite consensus disorder prediction 496 523 - -
Stsc30426g00021 1031 MobiDBLite consensus disorder prediction 324 343 - -
Stsc30426g00021 1031 MobiDBLite consensus disorder prediction 973 1004 - -
Stsc30426g00021 1031 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 214 255 IPR028942 -
Stsc30426g00021 1031 ProSiteProfiles HARE-type HTH domain profile. 3 72 IPR007759 GO:0006355
Stsc30426g00021 1031 MobiDBLite consensus disorder prediction 816 840 - -
Stsc30426g00021 1031 MobiDBLite consensus disorder prediction 104 126 - -
Stsc30426g00021 1031 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1029 IPR044977 GO:0006357
Stsc30426g00021 1031 MobiDBLite consensus disorder prediction 352 372 - -
Stsc30426g00021 1031 MobiDBLite consensus disorder prediction 95 155 - -
Stsc30426g00021 1031 MobiDBLite consensus disorder prediction 963 1031 - -
Stsc30426g00021 1031 MobiDBLite consensus disorder prediction 813 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30426g00021 Stsc-Chr30426 58672 62507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30426g00021 1 956 Homeobox Transcription Factor Family AT1G28420 43.737 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30426g00021 - - ccaj:109811517 1401.73