Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30426g00020 ATGGGGTTAGATTACTATAAGACCTTGGAGGTAGAGAGAACTGCCACAGATGAAGACTTGAAGAAAGCTTACAGAAAGCTTGCAATGAAATGGCACCCTGATAAGAATCCAACCAACAAAAAAGATGCTGAGACTAAATTCAAACAGATCTCTGAAGCCTATGAGATTCTAAGTGATCCGCATAAGAGAGCAATTTGTGATCAATATGGAGAAGAGGTCCTCAAAGGGCAAAGACCAACTCCTGGGGGTGGACCAACAATGTTTAGGTTCAACCCCAGAAATGCAGAAAGCATCTTTGCTGAAGTTTTTGGATGTTCAAGCCCCTATGGAGGAATGGGAATGGGAATGGGAAGAGGAAGGGGCATGAGGGGTGGTTATGGTGGATCTTGGGTGTCAAGGTCCTTTGGTGGAATATTTGGCAGTGACATATTCAGTTCAGCTAGAGAAGAAGCCACACCCATGAATCAAAGTCCACGCAGGGCTCCTCCCATTGAAAACACACTGCTTTGCACCCTTGAGGAGCTCTACAAGGGCACTACCAAAAAGATGAAGATTTCAAGGGAAGTTTTGGATGCAAGTGGGAAAGTTATTCCTGTGGAGGAAATCTTGACCATTGAAATCAAACCTGGCTGGAAAAAGGGAACAAAAGTCACATTCCAGGAGAAAGGGAATCAGCAGCCAAATGTAATAGCAGCAGATGTTGTGTTCATCATTGATGAGAAGCCTCACAATGTGTTTACAAGAGATGGTAATGATTTGGTTGTCAAAGAAGAGATATCCCTTATTGAAGCTGAAGCACAATCAGGCTACACTGTACATCTAACAACTCTAGATGGCAGAGATCTGACCATTTCCATAAACAATGCGATTCAACCGAACTATGAAGAGGTCGTTGCAGGAGAAGGTATGCCGTTTCCAAAAGATCCTTCAAAGAGGGGTGACCTCAGGATCAAGTTCAACATACTAGTCAGAGACAAGATAGATGCTGGAGCAGAAAAACAAAACTAA 1008 0.4325 MGLDYYKTLEVERTATDEDLKKAYRKLAMKWHPDKNPTNKKDAETKFKQISEAYEILSDPHKRAICDQYGEEVLKGQRPTPGGGPTMFRFNPRNAESIFAEVFGCSSPYGGMGMGMGRGRGMRGGYGGSWVSRSFGGIFGSDIFSSAREEATPMNQSPRRAPPIENTLLCTLEELYKGTTKKMKISREVLDASGKVIPVEEILTIEIKPGWKKGTKVTFQEKGNQQPNVIAADVVFIIDEKPHNVFTRDGNDLVVKEEISLIEAEAQSGYTVHLTTLDGRDLTISINNAIQPNYEEVVAGEGMPFPKDPSKRGDLRIKFNILVRDKIDAGAEKQN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30426g00020 335 Gene3D - 161 242 - -
Stsc30426g00020 335 FunFam DnaJ subfamily B member 13 243 323 - -
Stsc30426g00020 335 FunFam Dnaj homolog subfamily b member 160 241 - -
Stsc30426g00020 335 FunFam DnaJ subfamily B member 13 3 113 - -
Stsc30426g00020 335 SMART dnaj_3 3 62 IPR001623 -
Stsc30426g00020 335 CDD DnaJ 4 59 IPR001623 -
Stsc30426g00020 335 Gene3D DnaJ domain 3 112 IPR036869 -
Stsc30426g00020 335 SUPERFAMILY HSP40/DnaJ peptide-binding domain 158 254 IPR008971 GO:0006457|GO:0051082
Stsc30426g00020 335 Pfam DnaJ domain 4 67 IPR001623 -
Stsc30426g00020 335 CDD DnaJ_C 162 321 - -
Stsc30426g00020 335 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Stsc30426g00020 335 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 326 IPR008971 GO:0006457|GO:0051082
Stsc30426g00020 335 Gene3D - 243 323 - -
Stsc30426g00020 335 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 329 - -
Stsc30426g00020 335 Pfam DnaJ C terminal domain 165 321 IPR002939 -
Stsc30426g00020 335 SUPERFAMILY Chaperone J-domain 4 117 IPR036869 -
Stsc30426g00020 335 PRINTS DnaJ domain signature 24 39 IPR001623 -
Stsc30426g00020 335 PRINTS DnaJ domain signature 42 62 IPR001623 -
Stsc30426g00020 335 PRINTS DnaJ domain signature 62 81 IPR001623 -
Stsc30426g00020 335 PRINTS DnaJ domain signature 6 24 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30426g00020 Stsc-Chr30426 56582 59362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30426g00020 5 74 C2H2 Transcription Factor Family AT1G74250 31.081 1.17e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30426g00020 K09510 - jre:108984177 461.455