Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30424g00001 ATGGGAAGTGGACTCTCTACCTTGTGTTCATGCCTCGAACCGCCGGAGGCCAACCAACCGGACCTCAACAACGACGTCATCTTCGCCGCCACCGAACCACTCGACGAAACACTCGGCCATTCCTTCTGCTACGTCAGATCCTCCAACCGGTTCCTCTCTCCAACGCACTCCGATCGCTTCGTTTCCCCATCCGCCTCACTCCGTTTCTCTCCAACTCACGACCCGATCCATAGAACCCGACCCGAACCACCCGAAACTGCATTCAAGGCCATTTCGGGAGCCTCTGTTAGTGCTAACAGCTCCGTTCCCAAGACAGTTATTCAGTTAGAAGAAGAGGCCACCGACTGTGCCGGTAACAGAGCAGCTGGATTATTAGGAGGAGGGACCGTTGTCAACGGTTTCGAGAGTACGTCGTCGTTTAGCGCGCTACCGCTGCAGCCGGTTCCTCGCGGTGGAGAGCCTTCTGGAACATTCGAGAGGGGAGGAGGGTTCTTCCTCTCTGGACCAATTGAGAGCGGTGCCGGTGCGCTCTCCGGGCCGCTTAATTCCGGCCCCGCCGCTACCGCCGCCGGGCTCCCGTTCTCGGCGCCGCTGGGAGGGGTTTACGTGAGGAAGAAGAAGAGGAAGAATGGTGTGTCCGGGTTCAGGAAGGCGTTTCAGAGAAGCGTGCCGGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGCTGAACTTCGTCGGAAGGAAGGAAGTTCAGGGTTGCGAGGGGAGAGAGGAGACGGCGAGAGAGGAGAGCAATGTGCAGTGGGCACTAGGGAAGGCCGGCGAGGACAGGGTGCACGTGGTTGTGTCGGAGGAGCAGGGTTGGCTGTTCGTCGGGATTTACGACGGTTTCAACGGCCCCGACGCACCGGAGTTCCTGATGGGACATCTCTACCGTGCTGTCCACAACGAGCTTCAGGGTCTGTTCTGGGAAGATGAAGAAGCAGAGGGCAGAAACGACAATTCAAGTGTTCCCGCTGCTGAGGTAAAGAACACCGAGCGAGATGCCAGTGAAGACTCAAACTCTCACTCTGTAACCGCGGCTGTTAAGAAGGTAACGTTTCAGGTGGAGGGAACGGAAAGCAGGAGGCGTAGGCTATGGGAATTTCTTGCTGAGGACCCCGAAGACGGCCTTGATCTTTCTGGTTCCGATCGGTTTGCGTTTTCCGTGGATGATGCTCTCAGTGTCAACAATGCCAATGCTGGCTCTGCTGTTAGCAGAAGGTGGCTGCTGTTGTCGAAATTGAAGCATGGGTTGTCTAAGCATAAAGAGGGTCAAGGTAGGAAGCTGCTGCCGTGGAGCTTTGGTGCGGAAGGGAAGGATGAGAAGGTGGAAACAGAGGCAGGGACTGAGGAGAAGTTTTCTTCTTGTGGTGGAGGCCGGAGGAGGCGGAAGGTTGGGCCGGTGGACCATGATCTTGTTTTGAGGGCATTGTCTCGTGCGCTTGAGGTGACCGAGCTGGCATATTTGGATATGACGGAGAAGCTTCTGGATACGAATCCAGAGCTTGCTTTGATGGGTTCTTGTTTGTTGGTTGCTTTGATGAGGGATGAGGATGTGTATGTGATGAACGTTGGGGATAGCCGTGCCATTGTTGCTCATTATGAGCCCAAAGACTGCGCCGCTGCTAGCACAGGATCCGGTATCAAGAAGGGTAATGCTGGGTTGAGCGCGGAGAGTATTGTTGAGGAGTCCTCGACAGTAGCGACAGGCGAAAGCGCAGGCAAGTTGGGGAATGAGGATCCTGCTCCGGAAATGAGGTTGGCGGCATTGCAGCTGTCCACTGACCACAGCACCTCCATTGAAGAAGAAGTCAATAGAATTAAAAATGAGCACCCCGATGATGGCCAATGCATAGTCAATGATCGAGTAAAAGGTCGTCTCAAGGTCACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCAAAATTGAACGATGCAGTGTTAGAAATGTTTCGCAACGAGTTTATTGGCACTGCTCCATATATATCCTGCTCTCCTTCGCTACGTCACCATAGATTATGCCCAAGGGATCAGTTCTTGATTATCTCATCTGATGGGTTATATCAATATCTAAACAATGAAGAAGTTGTTTCCCAAGTGGAGAGCTTCATGGAAAAGTTTCCAGAAGGAGATCCTGCTCAACATTTAATTGAAGAGCTGCTTCTCCGTGCAGCAAAGAAGGCTGGCATGGGTTTTCATGAGTTGCTTGATATCCCACATGGAGATCGGAGGAAGTACCATGATGATGTAACCGTCATGGTGATATCACTTGAAGGAAGAATCTGGAAATCCTCAGGGAAGTATCTGTGA 2331 0.5311 MGSGLSTLCSCLEPPEANQPDLNNDVIFAATEPLDETLGHSFCYVRSSNRFLSPTHSDRFVSPSASLRFSPTHDPIHRTRPEPPETAFKAISGASVSANSSVPKTVIQLEEEATDCAGNRAAGLLGGGTVVNGFESTSSFSALPLQPVPRGGEPSGTFERGGGFFLSGPIESGAGALSGPLNSGPAATAAGLPFSAPLGGVYVRKKKRKNGVSGFRKAFQRSVPEKKRPWVVPVLNFVGRKEVQGCEGREETAREESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHNELQGLFWEDEEAEGRNDNSSVPAAEVKNTERDASEDSNSHSVTAAVKKVTFQVEGTESRRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVNNANAGSAVSRRWLLLSKLKHGLSKHKEGQGRKLLPWSFGAEGKDEKVETEAGTEEKFSSCGGGRRRRKVGPVDHDLVLRALSRALEVTELAYLDMTEKLLDTNPELALMGSCLLVALMRDEDVYVMNVGDSRAIVAHYEPKDCAAASTGSGIKKGNAGLSAESIVEESSTVATGESAGKLGNEDPAPEMRLAALQLSTDHSTSIEEEVNRIKNEHPDDGQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDAVLEMFRNEFIGTAPYISCSPSLRHHRLCPRDQFLIISSDGLYQYLNNEEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGMGFHELLDIPHGDRRKYHDDVTVMVISLEGRIWKSSGKYL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30424g00001 776 Gene3D - 240 771 IPR036457 -
Stsc30424g00001 776 MobiDBLite consensus disorder prediction 320 350 - -
Stsc30424g00001 776 SUPERFAMILY PP2C-like 265 765 IPR036457 -
Stsc30424g00001 776 SMART PP2C_4 252 762 IPR001932 -
Stsc30424g00001 776 Pfam Protein phosphatase 2C 597 728 IPR001932 -
Stsc30424g00001 776 CDD PP2Cc 476 764 IPR001932 -
Stsc30424g00001 776 PANTHER PROTEIN PHOSPHATASE 2C 252 763 IPR015655 GO:0004722|GO:0006470
Stsc30424g00001 776 MobiDBLite consensus disorder prediction 448 467 - -
Stsc30424g00001 776 ProSiteProfiles PPM-type phosphatase domain profile. 252 764 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30424g00001 Stsc-Chr30424 4824 9244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30424g00001 1 776 PP2C-type Phosphatase Gene Family AT2G35350 56.559 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30424g00001 - - mtr:11415473 1055.05