Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30418g00010 ATGGGTTGCTCCTTCTCTGGTCTTAACGCCCTATACGACGCCGTTAGCGGCGGAGCCGACGTTTGGATCAACGAGAATCGATTCCGCGTCGTTAGGCAGCTCGGCGAAGGTGGATTCGCCTTCGTTTACTTGGTCAAAGAAGTTCCCGCTGACTCTGCTTCTTCTTCCTCCGGCCTCGCCAACAAGCTCAAGAATCCTTCTCTTCTCTCCGATGATGGAACTTATGCGATGAAAAAGGTTCTGATTCAGAACAGTGAGCAATTGGCATTGGTGAAGGAGGAGATCCGTGTTTCTTCTCTTTTCAGTCATCAGAATCTGCTTCCACTTCTTGATCATGCTGTCATTTCAGTGAAGCCTACTCAAGATACATCTTGGACCCATGAAGCATACTTGCTATTTCCTGTTCATTTGGATGGAACATTGTTTGACAATGCTAATACAATGAGAGCCAAGAAGGAGTTCTATTCTACCACAGATGTTCTTCAAATATTTAGGCAGCTTTGTGCGGGACTCAAGCATATGCACGGTTTGGATCCTCCATATGCACATAATGATGTCAAACCAGGCAATGTTCTCATAACACATAGAAAGGGCCAACCTCCAATTGCCATACTTATGGATTTTGGCAGTGCTCGACCTGCGAGGAAGCAAATTCGCTCTCGGTCTGAGGCTTTGCAGTTGCAGGAGTGGGCAGCTGAACATTGCTCTGCCCCTTACCGAGCTCCTGAGCTGTGGGATTGCCCAAGCCAAGCTGATATTGATGAGAGGACTGATATTTGGTCACTTGGATGCACACTGTATGCGATTATGTATGGGGTATCTCCATTTGAATATGCACTTGGTGAATCAGGTGGGAGCCTGCAATTGGCTGTTGTAAATGCACAGGTGAAATGGCCAGCTGGACCTAAGCCTCCATATCCAGAGGCCCTGCATCAGTTTGTGATTTGGATGCTTCAGCCTCAAGCTACCGTTCGTCCGCAAATAGATGATATCATTATCCATGTTGACAAGTTGATCGCAAAGTTCTCTTCTTGA 1035 0.4696 MGCSFSGLNALYDAVSGGADVWINENRFRVVRQLGEGGFAFVYLVKEVPADSASSSSGLANKLKNPSLLSDDGTYAMKKVLIQNSEQLALVKEEIRVSSLFSHQNLLPLLDHAVISVKPTQDTSWTHEAYLLFPVHLDGTLFDNANTMRAKKEFYSTTDVLQIFRQLCAGLKHMHGLDPPYAHNDVKPGNVLITHRKGQPPIAILMDFGSARPARKQIRSRSEALQLQEWAAEHCSAPYRAPELWDCPSQADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVVNAQVKWPAGPKPPYPEALHQFVIWMLQPQATVRPQIDDIIIHVDKLIAKFSS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30418g00010 344 ProSiteProfiles Protein kinase domain profile. 28 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30418g00010 344 SUPERFAMILY Protein kinase-like (PK-like) 21 334 IPR011009 -
Stsc30418g00010 344 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 342 - -
Stsc30418g00010 344 SMART serkin_6 28 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30418g00010 344 CDD STKc_16 27 340 - -
Stsc30418g00010 344 Pfam Protein kinase domain 71 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30418g00010 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Stsc30418g00010 344 Gene3D Transferase(Phosphotransferase) domain 1 14 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30418g00010 Stsc-Chr30418 64592 68539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30418g00010 33 334 EF-hand Containing Proteins AT4G04710 25.000 1.09e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Stsc30418g00010 Pkinase 9.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30418g00010 K08856 - gmx:100803659 625.935