Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30418g00007 ATGGCTCCTCCGTGGGTCCAAGAGCTCCATCTCCCTCGTCTCACTGTCCCCGTCACCATCGACGACGTATTCCCTGTCATGCCATCCCACCCCATCCCTGTCCAAGACGGAGACACCCTTTACCTCTCCAATCTTGATGACATGATCGGAGCTCGTGTCTTTACACCCACAGTGTACTTTTACCAACACACCACCACCACCAACAGTTGTGCCAATTCACAAAAACCAATAACCAAAACACTTAAAGATGCCCTGGCTGATGTCTTGGTCCCTTACTACCCTCTCTCAGGGAGGCTAAGGGAAACCAAGAATGGGAAATTAGAAGTGTTCTTTGGTCCAAGTCAAGGTGCACTCATGGTTGAGGCACATTCCGATGTGACATTGTCCGAATTAGGAGACCTCACTGCACCAAACCCAACTTGGGAGCCATTAATATTCAAGTTCCCTAATGAAGAGCCATACAAAGTCCTTGACATGCCGCTTGTAATAGCGCAAATCACAATCTTCCGCTGTGGTGGATTTAGCATTGGGTTGCGACTTTGTCATTGCATCTGCGACGGCCTAGGAGCCATGCAGTTCCTAGGCGCATGGGCTGCGACGGCAAAGGCTAGGACTTTGGTAACAAACCCGAAGCCAATTTGGGATAGAGAGGTTTTCAAACCGCGTGACCCTCCTCATATACAATTCCCTCACATAGAGTTCATGAAAATTCAAGAAGGCTCAAATCTCACTATGTCATTATGGGAAACTAAACCGTTACAAAAATGCTACCGAATCACGCGCGAGTTTCAAAACTTTCTAAAATCCCTTGCCATGCCACATGACGGTTATGGTTGCACTACATTCGATGCAATGGCCACACACGTGTGGAGGTCGTGGGTCAATGCCCTCGACGTGAGACCGTTGACCTATGACTTAAGGTTGACTTTTTCTGTCAACGCAAGACAAAAGCTTCGGAACCCACCCTTGAGAGAAGGATTCTATGGCAATGTAGTGTGTGTGGCTTGCACAACAAGCAAAGTTTCAGAGCTTGTGAACCCTGAACGGCTTTCCGAGACAACAAGGTTGGTTCGGGAAGCAAGACTTAGTGTGTCAGAGGAGTATTTGCGGTCAACGGTGGATTTCGTTGACTTGGAGAGGCCTAAGCAGCTTGAATTTGGAGGGAAACTAACCATAACTCAATGGACAAGATTTTCAATCTATAACTGCACAGACTTTGGTTGGGGTAGGCCACTATATGCTGGGCCTATTGACTTGACTCCTACACCTCAAGTTTGTGTTTTTTTACCGGAAGGACAAGAGAGTGGTGGCGGTGGCGGCGGCGGCGGGTCTATGATTGTGTGTATATGTTTGCCTGAATCTGCTGCTCATAAGTTTGCCCAAGCATTCATGTTGTTGGATAACTCATAA 1410 0.4773 MAPPWVQELHLPRLTVPVTIDDVFPVMPSHPIPVQDGDTLYLSNLDDMIGARVFTPTVYFYQHTTTTNSCANSQKPITKTLKDALADVLVPYYPLSGRLRETKNGKLEVFFGPSQGALMVEAHSDVTLSELGDLTAPNPTWEPLIFKFPNEEPYKVLDMPLVIAQITIFRCGGFSIGLRLCHCICDGLGAMQFLGAWAATAKARTLVTNPKPIWDREVFKPRDPPHIQFPHIEFMKIQEGSNLTMSLWETKPLQKCYRITREFQNFLKSLAMPHDGYGCTTFDAMATHVWRSWVNALDVRPLTYDLRLTFSVNARQKLRNPPLREGFYGNVVCVACTTSKVSELVNPERLSETTRLVREARLSVSEEYLRSTVDFVDLERPKQLEFGGKLTITQWTRFSIYNCTDFGWGRPLYAGPIDLTPTPQVCVFLPEGQESGGGGGGGGSMIVCICLPESAAHKFAQAFMLLDNS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30418g00007 469 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 459 - -
Stsc30418g00007 469 Gene3D - 16 236 IPR023213 -
Stsc30418g00007 469 Pfam Transferase family 18 463 - -
Stsc30418g00007 469 Gene3D - 244 465 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30418g00007 Stsc-Chr30418 35447 36856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30418g00007 18 465 Monolignol Biosynthesis Gene Families AT5G48930 28.355 8.81e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30418g00007 K15400 - gmx:100802814 764.607