Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30417g00002 ATGGAGCTAATGAAAGTGCCAAGAGTGGAGGCCAAATTAAGAGTCTTCTCTTTCAAGATTCAGTTTGGGACTCAGATTGCAGACTTCAAGAGGAGTCTAAACACTGTGAACTCTGCCTGTGATGAGGTCCGAAATTCAGCTAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGCAACACACTGAATGAAGGAACGGCAAGGGGAGCTGCAGTTGGATTCAAGTTGGATAGTCTCTTAAAGCTTACTGACACTCGCGCTACTACTGGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTGGCTGAAAAGTCTCCAACACTCCTTGATTTTCACCTTGATCTAATTAGCTTGGAAGCATCCACGAAGATACAATTGAAGATGTTAGCAGAAGAAATGCAGGCAATCATCAAGGGACTAGAAAAGCTTAAACAGGAGCTGGCTGCATCTGAAACTGATGGCCCCGTGTCTGATGTTTTCCGTAAGGGTAGAAATGCAGATGCACTTGCACTCTATTTTGGTGAGGATCCAGCTCGCTGTCCATTTGAGCAAGTTACTGCAACTCTGTTGAATTTTACAAGACTGTTCCGAAAATCACACGACGAAAATATCAAACAAGCGGAGGCAGATAAGAAGAAGGCGGAGAAAGAGGCTGAAATGGAGAGGGAGAAGGCTAAAGCCGGGACACCAAGAAAGGGTGACCAGACACCAAGAAAGGGTGATTTAGAAGGCCAGACACCAAGAAAGTTTGATAGAGAGTTAGATGGCACGCAGACACCGAGAAAGATTGATAGAGAGTTAGATGGCACGCAGACACCGAGAAAGGGTGATAAAGAGAAGGAAGAAAGCTGA 858 0.4417 MELMKVPRVEAKLRVFSFKIQFGTQIADFKRSLNTVNSACDEVRNSAKLKEIMKKILYLGNTLNEGTARGAAVGFKLDSLLKLTDTRATTGKMTLMHYLCKVLAEKSPTLLDFHLDLISLEASTKIQLKMLAEEMQAIIKGLEKLKQELAASETDGPVSDVFRKGRNADALALYFGEDPARCPFEQVTATLLNFTRLFRKSHDENIKQAEADKKKAEKEAEMEREKAKAGTPRKGDQTPRKGDLEGQTPRKFDRELDGTQTPRKIDRELDGTQTPRKGDKEKEES 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30417g00002 285 PANTHER FORMIN-J 1 226 - -
Stsc30417g00002 285 Pfam Formin Homology 2 Domain 1 164 IPR015425 -
Stsc30417g00002 285 Coils Coil 199 228 - -
Stsc30417g00002 285 Coils Coil 128 155 - -
Stsc30417g00002 285 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 224 IPR015425 -
Stsc30417g00002 285 SUPERFAMILY Formin homology 2 domain (FH2 domain) 2 226 - -
Stsc30417g00002 285 SMART it6_source 1 277 IPR015425 -
Stsc30417g00002 285 Gene3D Formin, FH2 domain 1 231 IPR042201 -
Stsc30417g00002 285 MobiDBLite consensus disorder prediction 208 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30417g00002 Stsc-Chr30417 7839 9572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30417g00002 1 227 FH2 protein (formin) Gene Family AT5G07740 74.000 7.40e-117 366