Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30416g00005 ATGAACTTGGCTAATCCTATACCAACACCTATGATCTCATCTCTTAAATTGAGTGCCGATGATAATCCGATGCAGTATAGAGAGATTGTAGGTGTCCTTCAAACAATCCGGTCTCATGGAAGAGCAACAAACAAGCAAAGACAAGCAGAAGTTGGTTTATTTCGATTCGACAGCAAGGAGCTTTATACACTTAACATTTTAGCTGTGATGAAGTTGTGCTACATTGTGTACTTGGGAGCACATTCTCATGGTCCAAACCCTTCTTCTTATGACCTTGAATCTGCTACAAATTCTCATTATGATTTACTAAGTTCAACCTTGGGAAGCCATGAGAAGGCGAAAGAAGCAATTATTTATTCATATAATAAACACATAAATGGATTTGCTGCACTACTTGAAGAGGAAGAAGCAGCACAAATTGCAAAAAAGCCAGATGTAGTGTCAGTGTTCTTGAGCAAAGTGCATAAGCCACACACTACACGTTCATGGGAGTTTCTTGGACTGCGGAGGAATGGCATCAACACAGCATGGCAGATAGGGAGATATGGTGAAAATACAATCATAGCTAACATTGATACAGGTGTTTGGCCTGAATCTGAGAGCTTTAGTGAGAAAGGAATAGGTCCTGTTCCAGCAAAATGGCGTGGAGGTAATGTGTGCCAGATCAGCAAACTGGGTGGTTCTAACAAAACTCCATGCAACAGGAAACTAATCGGAGCAAGATTCTTCAGCAAAGCTTATGAGGCAAGCAAAGGCCAAATTCCGCCATCACAGCACACAGCACGTGACTTCCAAGGCCACGGCACCCACACCCTATCAACGGCCGGTGGCAACTTCGTACCCGGCGCAACCGTTTTGGGCAACGCCAACGGCACCGCAAAGGGTGGTTCACCGAGAGCCAGGGTTGCAGCCTACAAGGTGTGCTGGTCCACCATAGACGAGACTAGTTGCCTTGGCGCTGACGTGTTGGCTGCCATTGACCAAGCCATCGCCGACGGCGTTGACGTCATCTCTGTTTCTGCTGGTAGCACCAGAACAGAAATAAACTCTGATGAAATTTTCACCGATGAGGTCTCCATAGGAGCGTTCCATGCGCTTTTTAGAAACGTTGTTCTTGTTGCTTCTGCTGGTAATGATGGACCCACACCTGAGACCGTTGTCAATGTGGCTCCATGGCTGTTCACTGTTGCTGCTAGCACCATTGACAGGGACTTCAGCAGTAACATCACTCTTGGTAACAACCAAGTACTCACCGGAGCCAGTCTTTTCGTAAATTTACCATCCAATCAGTCCTTTCCATTGATCCTTGCATCTGATGCTAGATTTGCTAATGCCACAATTGAAGATGCACAAGTTTGTAAGCCTGGAACACTTGATCCTGCAAAAGTAAGTGGCAAAATAGTGATGTGCCTTCGAGGTGGGAAAATAAGATCGGTTGCTGAAGGCCAAGAAGCTTTATCTGCAGGTGCAGTTGGAATGGTTTTGGAAAACGATGATCAGAGTGGAAATACAGTTATAGCTGAGCCTCATGTTTTGTCCACTACAAATACGCACAAAACTAATGAGGGAAAAAATGTTTATGATTATTACAACAGTACCGAGAGCCCTATTGTTAGCATGTCAGCAGCAAAAACATTGCTTGGAATAAAGCCAGCTCCAGTTATGGCCTCATTCTCATCTAGAGGTCCAAATCCTATTCAACCATCAATACTCAAGCCTGATATAACTGCACCAGGTGTGAATATACTTGCATCATATTCCTTGGCGGCAAGTTTATCTAATTTGCCATCAGACACGCGCCGCGGATTTCGTTTCAATGTGCTGCAAGGAACTTCTATGTCATGCCCTCATGTCTCTGGCGTTGCTGGTCTTCTCAAAACTCGTCATCCTAATTGGACTCCTGCAGCTATCAAATCTGCCATCATGACCACAGCAACTACACAAGATAACACCAATGGAGCTATTCAAGATGCAGATAATACATTAGCTACACCTTTTGCTTATGGTTCAGGACATGTTCAACCAGACTTAGCCATGGACCCTGGACTTGTTTATGACATTACCATTTTCGATTACTTAAACTTCTTATGTGCTTCCGGATACAGTGAAAACCTCATTGCATCACTCATTTTCAACAAGACCTTCATATGCTATGGATCTCACAGAGTAACAGATTTAAATTACCCTTCAATCACATTGCCAAATATCGGATCTAACGCAGAGAATGTTACTCGCACGGTAACTAATGTTGGACCTCCAAGCACATACGTTGCAAATGCAGAGTTACCTGGATTTAATATTGTTGTGGTGCCAAGTTCCTTAACGTTCAAGAGAGTTGGTGAGAAGAAGAGGTTCCAGGTAATTGTAGAGGCAACAAGTGAGAGTCCGAAAGGGAGTTATCAATTTGGAGAGCTGAAATGGACAAATGGAAACCACGTTGTTACAAGTCCAATTGTTGTGAGGCTCACATCATCTGAGTTGAGAAGTGCATACTAA 2496 0.4383 MNLANPIPTPMISSLKLSADDNPMQYREIVGVLQTIRSHGRATNKQRQAEVGLFRFDSKELYTLNILAVMKLCYIVYLGAHSHGPNPSSYDLESATNSHYDLLSSTLGSHEKAKEAIIYSYNKHINGFAALLEEEEAAQIAKKPDVVSVFLSKVHKPHTTRSWEFLGLRRNGINTAWQIGRYGENTIIANIDTGVWPESESFSEKGIGPVPAKWRGGNVCQISKLGGSNKTPCNRKLIGARFFSKAYEASKGQIPPSQHTARDFQGHGTHTLSTAGGNFVPGATVLGNANGTAKGGSPRARVAAYKVCWSTIDETSCLGADVLAAIDQAIADGVDVISVSAGSTRTEINSDEIFTDEVSIGAFHALFRNVVLVASAGNDGPTPETVVNVAPWLFTVAASTIDRDFSSNITLGNNQVLTGASLFVNLPSNQSFPLILASDARFANATIEDAQVCKPGTLDPAKVSGKIVMCLRGGKIRSVAEGQEALSAGAVGMVLENDDQSGNTVIAEPHVLSTTNTHKTNEGKNVYDYYNSTESPIVSMSAAKTLLGIKPAPVMASFSSRGPNPIQPSILKPDITAPGVNILASYSLAASLSNLPSDTRRGFRFNVLQGTSMSCPHVSGVAGLLKTRHPNWTPAAIKSAIMTTATTQDNTNGAIQDADNTLATPFAYGSGHVQPDLAMDPGLVYDITIFDYLNFLCASGYSENLIASLIFNKTFICYGSHRVTDLNYPSITLPNIGSNAENVTRTVTNVGPPSTYVANAELPGFNIVVVPSSLTFKRVGEKKRFQVIVEATSESPKGSYQFGELKWTNGNHVVTSPIVVRLTSSELRSAY 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30416g00005 831 Gene3D - 402 547 - -
Stsc30416g00005 831 Gene3D Peptidase S8/S53 domain 186 692 IPR036852 GO:0004252|GO:0006508
Stsc30416g00005 831 SUPERFAMILY PA domain 446 554 IPR046450 -
Stsc30416g00005 831 ProSiteProfiles Serine proteases, subtilase domain profile. 162 679 - -
Stsc30416g00005 831 FunFam subtilisin-like protease SBT1.5 402 547 - -
Stsc30416g00005 831 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 68 158 IPR037045 -
Stsc30416g00005 831 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 74 820 IPR045051 -
Stsc30416g00005 831 Pfam Peptidase inhibitor I9 74 154 IPR010259 -
Stsc30416g00005 831 Pfam PA domain 438 516 IPR003137 -
Stsc30416g00005 831 CDD Peptidases_S8_3 155 646 IPR034197 -
Stsc30416g00005 831 FunFam Subtilisin-like protease SBT1.5 185 412 - -
Stsc30416g00005 831 PRINTS Subtilisin serine protease family (S8) signature 183 202 IPR015500 -
Stsc30416g00005 831 PRINTS Subtilisin serine protease family (S8) signature 609 625 IPR015500 -
Stsc30416g00005 831 PRINTS Subtilisin serine protease family (S8) signature 263 276 IPR015500 -
Stsc30416g00005 831 Pfam Subtilase family 183 652 IPR000209 GO:0006508|GO:0008236
Stsc30416g00005 831 CDD PA_subtilisin_like 408 539 - -
Stsc30416g00005 831 Pfam Fibronectin type-III domain 725 820 IPR041469 -
Stsc30416g00005 831 SUPERFAMILY Subtilisin-like 157 683 IPR036852 GO:0004252|GO:0006508
Stsc30416g00005 831 ProSitePatterns Serine proteases, subtilase family, serine active site. 610 620 IPR023828 -
Stsc30416g00005 831 Gene3D - 696 823 - -
Stsc30416g00005 831 FunFam Subtilisin-like protease SBT5.3 66 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30416g00005 Stsc-Chr30416 52951 57659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30416g00005 74 822 Subtilisin-like Serine Gene Family AT2G04160 52.053 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30416g00005 - - gmx:100803751 1138.64