Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30409g00008 ATGGCATGGCTGCCAACTGCTACAGCTTTTGTTTTCCTACCATTCATCAGACACCACAAGGGTGTTCAAGAAAAGAATGATTCTAAAGCTTTCTATAAGTTCCTTTATATGTCACTAGTCCTTGCAGTGTTCCTCATGATTGTAATCATAGTTGAGAAATGTTTATCATTCAGTAAGAGTGAATATTCTGTCACCACCACTTTGATGCTTCTCTTGCTTGTTTTTCTTCCACTTGGTGTTGTTGTTCAGGAAGAACACAGAATCTGGAAGGCCAAAAAACAACAACACATGAATAATCCTGAAGATCCTCCAAATCCAAATCCAAAGCCTTTGAATATTGTAACAGTGATGAAGTCTGCAGAACCATCATCATCACCATCATCAGGTAGTTCTTGTTTCAAAGACATGTTGAGGGCACCAAAGAGAGGTGAAGATCATACAATACTTCAAGCAATTTTCAATCTTGACATGATGATTTTGTTCTTAGCTACCATATGTGGTTTAGGTGGGAATCTCACAGTGGTGAATAACTTGAGTCAAATTGGAACAGCATTAGGATATTCCCCACACAGCATAACAACATTTGTGTCTCTCATGGCAATTTGGATCTACCTAGGTAAAATTGTCCAAGGTGTGATCTCAGAGTTCATCATAAAAAGATTCAAGATCCCTAGGCCTTTGATGTTCACATCAATACTTTTGTTGTCATGTGTTGGTCACCTCTTGATTGCATTTAATGTCCCAAATGGCCTCTATGTAGCATCTATTGTAATTGGGTTCTGCTTTGGGGCAAATTGGCCAATACTTTTCTCTATAATTTCTGAACTTTTTGGACTTAAATATTACTCAACATTGTATAATGTTGGGTCAATAGCAAGTCCAATTGGGTCATATTTGCTTAGTGTGAGGGTTGCTGGGCACTTTTATGATAAAGAAGGTCTAAGGCAAATGGCAGCAATGGGGCTAAAGAGAAATCCAAATGAAGAGTTGAATTGTAATGGTGGTGAGTGTTACAAGTTAGCATTCATTATAATCACTGCTGTGTGTTTATTTGGAGCACTTGTGTCACTGGTTTTGGTGTATAGGACTAGAGAGTTATACAAAGGTGACTTGTACAAGAAGTTTAAAGAACAAGAAGAATCTACTATCAATACTGTTGTTGAAAGTGAACCTGCTGCAAATTGA 1185 0.3772 MAWLPTATAFVFLPFIRHHKGVQEKNDSKAFYKFLYMSLVLAVFLMIVIIVEKCLSFSKSEYSVTTTLMLLLLVFLPLGVVVQEEHRIWKAKKQQHMNNPEDPPNPNPKPLNIVTVMKSAEPSSSPSSGSSCFKDMLRAPKRGEDHTILQAIFNLDMMILFLATICGLGGNLTVVNNLSQIGTALGYSPHSITTFVSLMAIWIYLGKIVQGVISEFIIKRFKIPRPLMFTSILLLSCVGHLLIAFNVPNGLYVASIVIGFCFGANWPILFSIISELFGLKYYSTLYNVGSIASPIGSYLLSVRVAGHFYDKEGLRQMAAMGLKRNPNEELNCNGGECYKLAFIIITAVCLFGALVSLVLVYRTRELYKGDLYKKFKEQEESTINTVVESEPAAN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30409g00008 394 Pfam Nodulin-like 1 81 IPR010658 -
Stsc30409g00008 394 Gene3D MFS general substrate transporter like domains 152 368 IPR036259 -
Stsc30409g00008 394 Pfam Major Facilitator Superfamily 161 364 IPR011701 GO:0022857|GO:0055085
Stsc30409g00008 394 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 370 - -
Stsc30409g00008 394 MobiDBLite consensus disorder prediction 92 111 - -
Stsc30409g00008 394 SUPERFAMILY MFS general substrate transporter 69 365 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30409g00008 Stsc-Chr30409 38992 41125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30409g00008 1 378 Nodulin-like Gene Family AT2G39210 53.708 3.23e-145 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30409g00008 - - gmx:100789645 527.324