Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30406g00005 ATGGTGGTGCCAGAGGCGGAGATGAACAACAACTCCCAGGGAGAAGTGGAATCGCCGCTACTCCAGGCTGAGCAACAAGGCGGCAAGAACAACAACCACCCATTCTCGTCCCTTGGGAGACAATCCTCCATATACTCTCTTACCTTAGATGAGTTCCAGCACACACTCTGCGACAACGGCAAGAACTTCGGATCCATGAACATGGACGAGTTTCTCAGCAGCATTTGGAATGCTGAAGAGAATCAAGCCATCGTCAACTCTTCTCACAACAACAACAACAACAACATGACTCTCAGTGAAGCTTCTTCTGCTGATAAAGCAATCATGATGAGGGAACAGCAGCACCAGCAGCAGCAGCAGAGTCTCCCTCGGCAAGGATCACTCACCATTCCTGCACCTCTATGCCGAAAAACCGTGGAGGAGGTTTGGTCTGAGATACATAATAAAGGACAACAGAATCAGCAGCAGCAGCATCATCAGCAGAGAAAGAGCAATGGCGGAGTGAATAATAATACCGAGACTACTACCCATCGCCAGCCAACTTTTGGGGAGATGACTTTGGAGGATTTCTTGGTCAAAGCAGGGGTAGTCAGGGAACAGTGTCCAATGCCGGTGCAACCACCACCACCACCACAACCAGCAGTGACTTCTCATCATCACCATCACAATCCTCAGCAGCAGTATGGGGTGTATTCAAGTAACAACTCTGCAGCAATGGCTCCTTCTTTTGTTGGAAGGACTGTTATTGGTGGTGGTGTGGTTGCGCCTGCTCCGCCTTACCAGGCGGAGCCTTCGGGATACCCTGGGAGCGGTGGGAAGTGGGATGGTGGTGGGGGCGGAGGGTACCCTGCGGCGGGGTCTGGCGGTGGGGTATGTTATGGAGGGAGGGTGGTGAATGGAGGGGGTGGTGGGTATGGGGTGGGGCCGTTGAGTCCGGGGTCTTCTGACGGGGTGGGAGCTGGGGAGGGGCAGTTTGGGGTTGATATGGGTGTGTTGAGGGGACGGAAGAGGATGGTGGATGGTCCCGTCGAGAAGGTGGTGGAGCGACGGCAGCGGAGGATGATCAAGAACAGAGAATCTGCCGCTAGATCTAGAGCCAGAAAACAGGCATATACAGTTGAATTGGAAGCAGAACTCAACCAACTCAGAGAAGAGAACGCCCAACTTAAACAGGCTCTGGCTGAGTTTGAGAGGAGAAGAAAGCAACAGTGTTTGGAGGAAGTGAATGTTAGAGCTCAAACCAAAGCTCAGAAGGCAACAGAGAAATTGAGAGCATTGAGAAGGAACCTAAGCTGTCCTTTGTGA 1305 0.5234 MVVPEAEMNNNSQGEVESPLLQAEQQGGKNNNHPFSSLGRQSSIYSLTLDEFQHTLCDNGKNFGSMNMDEFLSSIWNAEENQAIVNSSHNNNNNNMTLSEASSADKAIMMREQQHQQQQQSLPRQGSLTIPAPLCRKTVEEVWSEIHNKGQQNQQQQHHQQRKSNGGVNNNTETTTHRQPTFGEMTLEDFLVKAGVVREQCPMPVQPPPPPQPAVTSHHHHHNPQQQYGVYSSNNSAAMAPSFVGRTVIGGGVVAPAPPYQAEPSGYPGSGGKWDGGGGGGYPAAGSGGGVCYGGRVVNGGGGGYGVGPLSPGSSDGVGAGEGQFGVDMGVLRGRKRMVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENAQLKQALAEFERRRKQQCLEEVNVRAQTKAQKATEKLRALRRNLSCPL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30406g00005 434 CDD bZIP_plant_BZIP46 349 403 - -
Stsc30406g00005 434 MobiDBLite consensus disorder prediction 201 229 - -
Stsc30406g00005 434 Coils Coil 365 406 - -
Stsc30406g00005 434 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 39 415 IPR043452 GO:0003700|GO:0045893
Stsc30406g00005 434 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 352 367 IPR004827 GO:0003700|GO:0006355
Stsc30406g00005 434 MobiDBLite consensus disorder prediction 110 127 - -
Stsc30406g00005 434 Gene3D - 347 402 - -
Stsc30406g00005 434 MobiDBLite consensus disorder prediction 147 182 - -
Stsc30406g00005 434 MobiDBLite consensus disorder prediction 110 129 - -
Stsc30406g00005 434 MobiDBLite consensus disorder prediction 147 185 - -
Stsc30406g00005 434 Pfam bZIP transcription factor 349 398 IPR004827 GO:0003700|GO:0006355
Stsc30406g00005 434 Coils Coil 409 429 - -
Stsc30406g00005 434 SUPERFAMILY Leucine zipper domain 349 398 IPR046347 GO:0003700|GO:0006355
Stsc30406g00005 434 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 347 403 - -
Stsc30406g00005 434 SMART brlzneu 345 410 IPR004827 GO:0003700|GO:0006355
Stsc30406g00005 434 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 347 399 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30406g00005 Stsc-Chr30406 42178 44663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30406g00005 1 404 bZIP Transcription Factor Family AT2G36270 53.917 2.00e-109 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc30406g00005 bZIP_1 7.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30406g00005 K14432 - gmx:100790948 440.269