Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30398g00013 ATGGCTTCAGTTTACCGCAATTCGAGCTCAGGATCGGAGGGCGGAGATCCCGCGATGGACGAGAGGAAGAGGAAGAGGATGCTGTCGAACCGCGAATCGGCGCGGCGGTCGCGGATGAAGAAGCAAAAGCAGCTTGAGGATCTGACGGGGGAGGTGAAGCGGCTTGAGGTCTCGAACAAGAGCATGATTGAGGCCATTAAGGTGAAGGAGGAAGGTTATGCAAAGATTGAAGCCGCAAATGGTGTAATCAGGGCTCAGATGATGGAGCTGGAGGACAGGCTCAGATTCCTCAATTCTATTCTCGAAATTGCTGAAGTCGTTGGTGGCGGCAGCAGCGGTGATCTCTCCGTTGATTTTCCGGAGATTCTGGATCCTCTCTTGAAGCCATGGCAGATTCCTCACCCATTTCAGCCAATTATGGCTTCGGCAGACATGTTCCTGCATTGA 447 0.528 MASVYRNSSSGSEGGDPAMDERKRKRMLSNRESARRSRMKKQKQLEDLTGEVKRLEVSNKSMIEAIKVKEEGYAKIEAANGVIRAQMMELEDRLRFLNSILEIAEVVGGGSSGDLSVDFPEILDPLLKPWQIPHPFQPIMASADMFLH 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30398g00013 148 FunFam BZIP transcription factor 20 71 - -
Stsc30398g00013 148 Gene3D - 20 72 - -
Stsc30398g00013 148 MobiDBLite consensus disorder prediction 16 49 - -
Stsc30398g00013 148 CDD bZIP_plant_GBF1 23 66 IPR045314 GO:0003700|GO:0006355
Stsc30398g00013 148 MobiDBLite consensus disorder prediction 1 49 - -
Stsc30398g00013 148 Pfam bZIP transcription factor 22 77 IPR004827 GO:0003700|GO:0006355
Stsc30398g00013 148 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 20 62 IPR004827 GO:0003700|GO:0006355
Stsc30398g00013 148 SUPERFAMILY Leucine zipper domain 22 71 IPR046347 GO:0003700|GO:0006355
Stsc30398g00013 148 Coils Coil 31 65 - -
Stsc30398g00013 148 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 25 40 IPR004827 GO:0003700|GO:0006355
Stsc30398g00013 148 SMART brlzneu 18 82 IPR004827 GO:0003700|GO:0006355
Stsc30398g00013 148 PANTHER BZIP TRANSCRIPTION FACTOR 44 7 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30398g00013 Stsc-Chr30398 65643 66089 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30398g00013 9 146 bZIP Transcription Factor Family AT3G62420 50.704 3.38e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc30398g00013 bZIP_1 7.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30398g00013 K25786 - gmx:780550 189.889