Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30398g00011 ATGAGTGCATCGGAGATGGACCCGTTAGCAGAGGAGCTGAATAACACATGCGATTCGGAGGCGGAAGGTATGAGTGAGGGTTCGGAATGGTCTGAAGAAGGGAATGTCAATGGTTCTGAGTCAGTGGATATGGTGATCGAGGACGACTGTACTGACTATGGTGACGTGATTGAGTTGACTCCGGAGTCGATAATGTGGAAGCTATTTCGTAGTGAGGATGCTGCTTACGAATTTTACAAGAGGTTTGGAAAATGTTATGGATTCGGTATCAGGAAGGCAGATTTTGGCAAGGATGATTCAGGAAGGGTGATTAGGCGACGATTCTTTTGTAATAGGGCAGGGTTAAGGGATCCGAAACACTACAACAGACTGGATAGGCGTAGGGAGCACAAGCCTGAGACTAGGAGCAACTGCGAGGCTAAGTTATCAATTTACCTGGACGTAGAGGCAACTGTGTGGAGGGTTAGGAAGGTTGTTATGGAACATAATCATGACTTAACACCGGCTGGCATGATTCACATGATGCCGAATTTCAGGAACATGACCGATTCCTCGAAGGCACAGATAAATGGCATGCAGGATCATGGCATCACTACTTCTAAGATCTTAGGTTACATGGTGGGACATGCCGGTGGATATTCATTTGTTGGCTTCACTAAGAAAGATGCATATAATTATGTGCAGAGAACCAAGCGTGCAAGGATTATGGATGGGGACTCTAATGCAACCATTGGGTACCTAGAGGGGAAGGCGACCTTGGATCCGATGTATGCGGCAAGGTATTTGGTGACTGAGGAGAGGATGTTAGCGAACATGTTTTGGGCAGATGGCGGAAGTAGGATAGATTACCAATTCTTCGACTATGTTATTGCCTTTGATTCGATTTACAAGAAAAACAAGGACAAGAGACCATTGGTGATTTTCTCTGGTTTAAACAATCACAAACATACGACAATCTTTAGGTTTGGACTATTGATGTACGAAAATCTTTTAACAAACAAGATCTCTCAACATTTCGACAAGTGA 1026 0.4435 MSASEMDPLAEELNNTCDSEAEGMSEGSEWSEEGNVNGSESVDMVIEDDCTDYGDVIELTPESIMWKLFRSEDAAYEFYKRFGKCYGFGIRKADFGKDDSGRVIRRRFFCNRAGLRDPKHYNRLDRRREHKPETRSNCEAKLSIYLDVEATVWRVRKVVMEHNHDLTPAGMIHMMPNFRNMTDSSKAQINGMQDHGITTSKILGYMVGHAGGYSFVGFTKKDAYNYVQRTKRARIMDGDSNATIGYLEGKATLDPMYAARYLVTEERMLANMFWADGGSRIDYQFFDYVIAFDSIYKKNKDKRPLVIFSGLNNHKHTTIFRFGLLMYENLLTNKISQHFDK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30398g00011 341 PANTHER OS01G0519700 PROTEIN 64 328 - -
Stsc30398g00011 341 Pfam FAR1 DNA-binding domain 77 167 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30398g00011 Stsc-Chr30398 52209 53995 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc30398g00011 FAR1 1.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30398g00011 - - ahf:112758792 404.445