Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30395g00001 ATGCCTATATGGTGGGCGAATCCGTTTTCAAATTCAAAAGAAACCAAGAAGAAAGCAAGTAAGGAAAGTTTTATTGGTACATTGCATCGGAAATTTAAAATACCATCTGAAGGTAGATTAAACAGTAGATCTGGAGGTCCTGGTAGACGCTGCAATGACACAATTTCAGAGAGGGGGGATCGCTCTCCAGCTGAATCAAGATCTCCTTCGCCTTCCAAAGTGGCAAGATGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCATTACCACTTCCTGGTCTTCACCCTTCAAGTATAGGCCGAGTAGATTCTGAAATTAGCATATCATCAAAATCAAGACTGGAAAAGAGCTCCAAGCCATCATCGTTTCTGCCACTTCCAAGACCTGCATGCATGCGAGGAAGGCCAAATCCTTCAGATTTGGATGGAGATATGGTTGCTTCAATCTCCAGTGATGGTTCTGCTGATAGTGATGACCAAACAGAGTCACGCAACCGTAGTCCTTTCGCAGCTGACACTGATACTGGGACTAGAACAGCTGCCGACAGTCCTTCCAGCATGATGCTCAAGGATCAACCATCTGTTGTCTCCCAAGTAAATTCAAGAGAAGCCAAAAAACCAGTGAACATTCTAAGTAATCATATGTCTTCCACTTCACCAAAACAGAGGCCTTTAAGGAACCATGTTCCGAATCTGCAAGTTCCTCCTCATGGTGCCTTCTATAGTGCTCCAGACAGTTCCTTGTCGAGCCCATCAAGAAGTCCACTGAGAGCATTTGGCACAGATCAGATGTTGAACTCTGCCTTCTCGGCTGGAAAGCCATACCCTGAGTTCAATTTGGCTGGTTCAGGCCACTGCTCTAGTCCTGGTTCCGGTCACAATTCTGGCCATAATTCAATGGGTGGGGACATGTCAGGACAGTTATTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCGGTGCCCAGTCCCAGAATGACTAGTCCTGGTCCTAGTTCTAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCCAGAGCTGGGGGAACACCCACTGAATCACAGACAAGCCGGGCTGATGATGGCAAACAACAAAGTCATCGCTTGCCACTTCCTCCATTGACAATTTCCAATTCCTCGCCTTTCTCTCATTCCAATTCTGCAGCAACATCTCCATCCATGCCAAGAAGTCCAGCTAGAGCGGAAAATCCAGTGAGCCCTGGCTCGCGTTGGAAAAAAGGAAAGCTGATTGGTAGAGGCACATTCGGACATGTCTACGTTGGCTTCAATAATGATAGTGGTGAAATGTGTGCAATGAAGGAGTATTATGGTTCTGAAACAGTAGATGACAAGCTTTACATATATCTGGAGTATGTATCTGGAGGCTCCATATATAAACTTCTTCAAGAATATGGGCAGTTTGGTGAACTAGCTATTCGTAATTATACTCAACAAATTTTGTCAGGGCTTGCTTATCTGCATGCTAAGAATACTGTCCACAGGGACATCAAGGGTGCAAATATACTTGTAGATCCAAATGGCCGGGTCAAGTTGGCAGATTTTGGCATGGCAAAACATATAAAAGGGCAATCATGTCCATTGTCAATAAAGGGAAGCCCTTATTGGATGGCTCCTGAGGTTATAAAGAACACTAGTGGATGCAACCTTGCTGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACCAAGCCCCCTTGGAGTCAATACGAAGGGGTTGCTGCCATGTTCAAGATAGGTAATAGCAAGGAACTCCCAAAAATTCCAGATCACCTCTCAAACGAAGGAAAAGATTTTGTAAGGAGATGTCTACAACGTGATCCACGTGATCGCCCTTCAGCCAGTGAATTGTTGGAGCATGCTTTTGTGAAGTGTGCTGCACCTTTGGAAAGACCTATTCTGGGTCCTGAAGCATCAGACCTTCATCCTGTAATTACACAGGGAACGAAAACTTTGGGTATTGCACAAGGAAGGAATCTTTCTACCTTGGATTCAGATAGACTTGCTGTCCATTCTTCTAGGGCCTTGAAAACTAATCCTCATGCAAGGTCTCTCTCTCTCTCTC 2098 0.4519 MPIWWANPFSNSKETKKKASKESFIGTLHRKFKIPSEGRLNSRSGGPGRRCNDTISERGDRSPAESRSPSPSKVARCQSFAERPHAQPLPLPGLHPSSIGRVDSEISISSKSRLEKSSKPSSFLPLPRPACMRGRPNPSDLDGDMVASISSDGSADSDDQTESRNRSPFAADTDTGTRTAADSPSSMMLKDQPSVVSQVNSREAKKPVNILSNHMSSTSPKQRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFGTDQMLNSAFSAGKPYPEFNLAGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPTESQTSRADDGKQQSHRLPLPPLTISNSSPFSHSNSAATSPSMPRSPARAENPVSPGSRWKKGKLIGRGTFGHVYVGFNNDSGEMCAMKEYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGQFGELAIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHIKGQSCPLSIKGSPYWMAPEVIKNTSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPKIPDHLSNEGKDFVRRCLQRDPRDRPSASELLEHAFVKCAAPLERPILGPEASDLHPVITQGTKTLGIAQGRNLSTLDSDRLAVHSSRALKTNPHARSLSLS 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30395g00001 699 Pfam Protein kinase domain 443 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30395g00001 699 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 62 442 - -
Stsc30395g00001 699 MobiDBLite consensus disorder prediction 282 413 - -
Stsc30395g00001 699 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Stsc30395g00001 699 MobiDBLite consensus disorder prediction 1 255 - -
Stsc30395g00001 699 Gene3D Transferase(Phosphotransferase) domain 1 410 644 - -
Stsc30395g00001 699 MobiDBLite consensus disorder prediction 14 37 - -
Stsc30395g00001 699 MobiDBLite consensus disorder prediction 102 119 - -
Stsc30395g00001 699 MobiDBLite consensus disorder prediction 284 314 - -
Stsc30395g00001 699 SUPERFAMILY Protein kinase-like (PK-like) 398 644 IPR011009 -
Stsc30395g00001 699 ProSiteProfiles Protein kinase domain profile. 412 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30395g00001 699 MobiDBLite consensus disorder prediction 166 226 - -
Stsc30395g00001 699 SMART serkin_6 412 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30395g00001 699 MobiDBLite consensus disorder prediction 371 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30395g00001 Stsc-Chr30395 40 4512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30395g00001 4 699 MAP Kinase Kinase Kinase AT1G63700 59.563 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Stsc30395g00001 Pkinase 1.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30395g00001 K20717 - gmx:100792783 1077.77