Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30392g00015 ATGTCACCCGAATATGCTATGGAAGGACAATTTTCATTTAAGTCAGATGTATATAGTTTTGGAGTTCTGCTTCTAGAAATCGTTACCGGCAGAAAGAACAGTGGCCAATATGATGACATTACAACGACAAATTTAGTTGGGCATATATGGGATCTGTGGAAAGATGGGCGAGCGATGGAGATTGTTGATGAGTGTTTATTAGAAGAGTCATGGAGTGACGGTGAAGTTGAAAGATGCATCCAAATTGGGCTTCTATGCGTGCAAGACTATGCCACAGACAGGCCATCAATGGCAGCAGTTTTATCCATGCTGGGAAATGACTCAGCTCTTCCTTCTCCAAAGCACCCAGCATTTATTTTCAAGAGGAGAACTAATTATGACGGTTCAGATCCATCAACTAGTGAAGGAGTTCACTCAGTAAACGACGTTAGTATGACTATGATTGAAGCTCGCTAA 456 0.4167 MSPEYAMEGQFSFKSDVYSFGVLLLEIVTGRKNSGQYDDITTTNLVGHIWDLWKDGRAMEIVDECLLEESWSDGEVERCIQIGLLCVQDYATDRPSMAAVLSMLGNDSALPSPKHPAFIFKRRTNYDGSDPSTSEGVHSVNDVSMTMIEAR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30392g00015 151 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 151 - -
Stsc30392g00015 151 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Stsc30392g00015 151 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30392g00015 151 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Stsc30392g00015 151 SUPERFAMILY Protein kinase-like (PK-like) 1 122 IPR011009 -
Stsc30392g00015 151 Pfam Domain of unknown function (DUF3403) 106 151 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30392g00015 Stsc-Chr30392 78363 78923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30392g00015 1 151 Receptor kinase-like Gene Family AT4G23150 47.436 4.90e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc30392g00015 PK_Tyr_Ser-Thr 7.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30392g00015 - - gmx:100812814 242.662