Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30392g00014 ATGTCGCCAGAATATGCAATGGAAGGACAATATTCAACAAAGTCAGATGTGTTTAGTTTTGGAGTGCTACTGTTAGAAATTGTGGCAGGCAAGAGGAACACAAGCCATAATCATGGAAGATCCTCCCCAAATTTAATTGGATACGTGTGGATGCTTTGGAGAGAAGGAAAGGCATTGGATTTAGTAGATTCATCACTTGGTCAATCCTACCCTTGTGCTACAGTTTTGAGGTGCATTCAAGTTGGATTATTGTGCGTGCAAGAAAATGTGAACAATAGACCTTCCATGTTAGAAGTTATTGTGATGCTAGGAAATGAAGCACCCATTCGCCAACCCCAAAAGCCAGCATTTTTATTCAACGACAACCGAGAGCTAGTGCAAGAGCCAGCAGCAATAATAATGGAAGATGGATCTTCATCTGTAAACGAAGTAACAACAAGTACAATCTTTGGCCGATAA 459 0.4074 MSPEYAMEGQYSTKSDVFSFGVLLLEIVAGKRNTSHNHGRSSPNLIGYVWMLWREGKALDLVDSSLGQSYPCATVLRCIQVGLLCVQENVNNRPSMLEVIVMLGNEAPIRQPQKPAFLFNDNRELVQEPAAIIMEDGSSSVNEVTTSTIFGR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30392g00014 152 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 145 - -
Stsc30392g00014 152 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30392g00014 152 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Stsc30392g00014 152 SUPERFAMILY Protein kinase-like (PK-like) 1 116 IPR011009 -
Stsc30392g00014 152 Gene3D Transferase(Phosphotransferase) domain 1 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30392g00014 Stsc-Chr30392 71994 72624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30392g00014 1 152 Receptor kinase-like Gene Family AT4G11460 43.396 1.33e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc30392g00014 PK_Tyr_Ser-Thr 1.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30392g00014 - - ahf:112791364 275.789