Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30392g00008 | ATGGGGTTCTTCAGCCCAGGCAAGTCAACTTCCCGTTACGTCGGAATCTGGTACAACAATCTGCCACAACAAACTGTTATTTGGGTTGCAAACAGAAACACTCCCATCAATGACACATCTGGAGTCCTCTCAATCAACCAACATGGAAATCTAGCACTCCATCACAACCATAGCATTCTTCCAATTTGGTCTACCAATGTTTCAACCACACCCTCTGATACAAACAAAGTTATAGCTCAACTCACAGACATAGCTAACCTTGTTCTGATCCTTAACGACACAAAAGCTGTCATCTGGCAAAGCTTTGATCAACCCACAGATACTTTGATTCCCCACCTGAGATTAGGATTTGACAGAGGAACAAACCAGAGTTGGGTCATCCAATCTTGGAAAACAGATGATGATCCTTCACCTGGTGACTTCACATTGAAGTTCAGCACCAGTGGTATGCCACAGTTGTTCTTATACAACAAGAACCGTCCATGGTGGCGAGGAGGACCATGGAACGGTGAGTTTTTCATGGGTATACCAAACATCAAACGAGATAACAACATTTTCAATGTTTCCTGTGAGGAAGATGAGAACCATGCAGCACTCTCATATAACACCTATGACAAATCGGTTCCCAGTTGGGTGGTGGTTCAGCAGTCGGGTTTCTTTCAAGTGTTCACTTGGGATAACCAGAGGAATCATTGGAACCGGTACTGGTCAGAGCCTACTGGTCAATGTGATAACTATGGAACATGTGGACCTAACAGCAACTGTGACCCTTTGAACTATGAGGACTTTCAGTGCACTTGTTTGCCCGGGTTTGAACCGAAATTCCCAAGTAACTGGTATGAGAATAGAGATGGATCAGGAGGGTGTGTGAGGAAGAAAGGTGTATCTGTTTGTGGGAGTGGAGAAGGGTTTGTGAATATTGAAGGATTGAAGGTTCCTGATACATCTGTGGCTATAGTTAAGGAGGGTTTGAGCTTGGAGGAGTGTGAGAGGGAATGCTTGAGAAAATGTTCTTGCAGTGCTTATGCAGTTGCTAATTTGGCCAATGGTGGAAGTGGATGTTTTTCATGGCATGGTGATTTGTTGGACATAGAGAAGCTTAGTGATCAAGGCCAAGAATTATTTGTACGTGTTGATGCTGTTGAATTAGCTAATTATTACAAGAAAAGAAAAGAAGCATTTGGTAAGAAAAATATTGTAGGGGTTCTGGTAGCTTCTTTGTTTTCAGTTCTCCTTATTCTGGCCTGTGTATATTACTTGCGGTTGCAGAAGAAAAAGAAAAAAGATAAGATCCAAAGGTCATCATTAGATTGGGATAAGCGTTTTGAAATTATTTATGGGATTGCTCGAGGTGTATTATATCTTCATCAAGATTCAAGACTAAAAATAATTCACAGAGATCTCAAAGCTAGCAATGTTCTCCTTGACACTGCAATGAATCCGAAAATCTCAGACTTTGGCATGGCTAGAATATTTGGCGAAGATCAAATCCAAGATAGAACGAGAAGAGTAGTCGGAACATATGGTTATATGTCACCCGAATATGCAATGGAAGGACGATATTCAACAAAATCAGACGTCTTTAGTTTCGGAGTCTTACTTCTAGAGATTATTGCTGGAAAGAGGAACACTGATGGTGGTGACAAAGAAAGAGACTCCCCAAATTTAATTGGATACGTAAGTAAAGAAGAGACAGGGAAACAAATTTAA | 1710 | 0.4123 | MGFFSPGKSTSRYVGIWYNNLPQQTVIWVANRNTPINDTSGVLSINQHGNLALHHNHSILPIWSTNVSTTPSDTNKVIAQLTDIANLVLILNDTKAVIWQSFDQPTDTLIPHLRLGFDRGTNQSWVIQSWKTDDDPSPGDFTLKFSTSGMPQLFLYNKNRPWWRGGPWNGEFFMGIPNIKRDNNIFNVSCEEDENHAALSYNTYDKSVPSWVVVQQSGFFQVFTWDNQRNHWNRYWSEPTGQCDNYGTCGPNSNCDPLNYEDFQCTCLPGFEPKFPSNWYENRDGSGGCVRKKGVSVCGSGEGFVNIEGLKVPDTSVAIVKEGLSLEECERECLRKCSCSAYAVANLANGGSGCFSWHGDLLDIEKLSDQGQELFVRVDAVELANYYKKRKEAFGKKNIVGVLVASLFSVLLILACVYYLRLQKKKKKDKIQRSSLDWDKRFEIIYGIARGVLYLHQDSRLKIIHRDLKASNVLLDTAMNPKISDFGMARIFGEDQIQDRTRRVVGTYGYMSPEYAMEGRYSTKSDVFSFGVLLLEIIAGKRNTDGGDKERDSPNLIGYVSKEETGKQI | 569 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30392g00008 | 569 | Gene3D | Transferase(Phosphotransferase) domain 1 | 421 | 569 | - | - | |
Stsc30392g00008 | 569 | Gene3D | - | 1 | 102 | IPR036426 | - | |
Stsc30392g00008 | 569 | MobiDBLite | consensus disorder prediction | 544 | 569 | - | - | |
Stsc30392g00008 | 569 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 1 | 102 | - | - | |
Stsc30392g00008 | 569 | Pfam | D-mannose binding lectin | 25 | 131 | IPR001480 | - | |
Stsc30392g00008 | 569 | ProSiteProfiles | EGF-like domain profile. | 239 | 277 | IPR000742 | - | |
Stsc30392g00008 | 569 | SMART | blect_4 | 1 | 105 | IPR001480 | - | |
Stsc30392g00008 | 569 | ProSiteProfiles | PAN/Apple domain profile. | 298 | 379 | IPR003609 | - | |
Stsc30392g00008 | 569 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 463 | 475 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc30392g00008 | 569 | ProSiteProfiles | Bulb-type lectin domain profile. | 1 | 102 | IPR001480 | - | |
Stsc30392g00008 | 569 | Pfam | S-locus glycoprotein domain | 163 | 275 | IPR000858 | GO:0048544 | |
Stsc30392g00008 | 569 | FunFam | Os07g0541700 protein | 426 | 507 | - | - | |
Stsc30392g00008 | 569 | ProSiteProfiles | Protein kinase domain profile. | 292 | 569 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30392g00008 | 569 | CDD | B_lectin | 1 | 105 | IPR001480 | - | |
Stsc30392g00008 | 569 | Gene3D | Hepatocyte Growth Factor | 296 | 376 | - | - | |
Stsc30392g00008 | 569 | Pfam | PAN-like domain | 298 | 364 | IPR003609 | - | |
Stsc30392g00008 | 569 | SMART | ntp_6 | 299 | 378 | IPR003609 | - | |
Stsc30392g00008 | 569 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 26 | 136 | IPR036426 | - | |
Stsc30392g00008 | 569 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 425 | 544 | - | - | |
Stsc30392g00008 | 569 | SMART | serkin_6 | 331 | 569 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30392g00008 | 569 | CDD | PAN_AP_plant | 298 | 378 | - | - | |
Stsc30392g00008 | 569 | Pfam | Protein kinase domain | 429 | 548 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30392g00008 | 569 | SUPERFAMILY | Protein kinase-like (PK-like) | 430 | 549 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30392g00008 | Stsc-Chr30392 | 42265 | 45707 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30392g00008 | 421 | 560 | Receptor kinase-like Gene Family | AT4G23280 | 61.429 | 9.43e-53 | 188 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Stsc30392g00008 | Pkinase | 8.4e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30392g00008 | - | - | pvu:PHAVU_002G2200000 | 624.394 |