Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30392g00007 | ATGGGAAGAGGAAGAGGTATCACTAGCCTCCTCTGTTTCTTCCTTTTTTGGATCTCCAAACCTTGTACTTGTACTACTTCTTCAGATACCTTAACAAAATCCCAAATCCTAAGAACAAACCAAACCCTCTTGTCTCCAAAGGGAATCTTCCAACTCGGATTCTTTTCCCCCACCGAAGATGATTCCACCTCCTCCTTGTACCTCGCCATATGGTACAACAACATTCATCCCAAAACAGTTGTTTGGGTTGCAAACAGAGACGCCCCACTTCAGAGCTCCACAGGGTTTCTCCAAATAGCCCAAACAGGAACCATCAACATAGTCCTCACCGATAATAACAACCATTCCTTCAAATCCATATGGTCTTCAAATCAAACCACACAACAACCACCTCAGAACCCACTTCTCCAGCTCTTAGATTCAGGGAACCTTGTTCTAAGAGAATCAAACGACCCGTCAAAGTATCTATGGCAGAGCTTCGATTACCCTACGGATACTCTGTTACCGGGAATGAAATTGGGTTGGAACTTAGACACAAACACGGAGAAGCACCTCACTTCATGGAAGTTCCAAGACCAAGACCCTTCAACCGGAGATTACTCTTTCAAGATGAACTTCCATGGCCTCCCTGAGATTTTCCTCTGGAACAAGAACAAGATAACATACAGAAGCGGGCCATGGAACGGCCAGAGATTCAGCGGCGTGCCAGAGATGCAACCCGTAACGGATTCAATCAAATTCACATTCCACGTTGATGAACACCAAGTGTACTACACATTCTTCATCGGGAACGAGTCGTTGTTCTCGAGGCTCTTGGTGAGTTCTTCCGGGGAGCTTCAGAGGCTGACGTGGATAGAGAGCACGCAGGCATGGAACAAATTCTGGTACGCTCCCAAGGACCAATGCGACTATTACAGGGAGTGTGGGGCCTACGGCGTTTGCGACACGAATGCGTCGCCGGTGTGCCAGTGTGTGAACGGGTTCAAGCCGAGGAACCCGGAGGCGTGGAATCTTCGAGATGGATCGAATGGGTGTGTTCGGAAGAGGGAGTTGGAGTGTGAGAGTGACGGGTTCTGGAAGATGGGGAATGTTAAGTTGCCGGAGACGACGAGGGTGTTTGTGAACCGGAGCATGGGGCTCTTGGAATGCAGAGAAATGTGCCGGAGGAACTGCTCTTGTAGTGGTTATGCGAATGTAGAGATCACCGGTGGGGGTACTGGATGTGTGACGTGGATTGGGGATCTCTTCGATATCAGGCAGTATCCTGCCGGTGGACAAGATCTCTATGTCAGGTTAGCAGCTTCTGAGTTAGCTGACATAGAATCTGGAGATGGTTCTCACAACACAGCTAAGGTTGTTGGCATTATAGTTGGTGCTACAGCTTTTGTAATTTTGGTGTTGGCTATATGTTTCTTGTTATGGAAGAAAAGGAAATTCCCATGCATGTTGGAGAGGGAGACAGTACACAGAGGTTCTCTGGAAAGGAGTCAGGATTTGTTGATGACTGAAGTGGTTTTTTCAAGCAATAGAGAACAGTCTAGTGAAAGGAAAATCGATGACTTAGAGTTGCCATTGTTTGATTTTAACACCTTAACAATGGCTACAAAGAACTTCTCTGAAGAGAATAAACTTGGACAAGGAGGATTTGGTGTTGTTTATAAAGGCAGGTTGATGGAAGGCCAGGAAATCGCTGTGAAGAGGCTTTCAAAAAATTCTGGACAAGGAGTTGAAGAGTTTAAGAATGAGGTAAAGTTGATTGTCAAACTTCAACACCGGAATCTTGTCCGGCTGCTTGGTTGCAGCATTCAGATGGACGAAAAGGTGCTTGTGTATGAGTACTTGGAAAATAGAAGCCTTGATGGGATTTTATTTGACAAGGCAAAAAGCTCCTCGTTAGATTGGTCAAGGCGCTTCAACATTATTTGTGGAATTGCTAGAGGGCTTCTTTATTTGCACCATGATTCCAGATTTAGGATCATCCATAGAGATCTCAAGGCAAGCAACATCCTACTCGACAAGGAAATGAATCCCAAAATATCAGATTTTGGGATGGCTAGAATTTTTAATACAAATCAAACGGAAGCTAATACAATGAGAGTTGTTGGAACATATGGCTACATGTCCCCTGAATATGCTATGGATGGAATCTTCTCGGTAAAGTCAGATGTTTTCAGTTTTGGGGTGTTAGTGTTGGAGATTATAGCTGGAAAAAAGAACAGAGGATTCTACTATGCAAATGCTGAGTTGAATCTTCTAGGGCATGCATGGAAGCAGTGGAAAGAAGGAAATGCATTGGAACTGATTGATTCATCAATTGACAATTCATATTCATCATCTGAGGTTCTTAGATGTGTACAAGTGGGGCTCTTATGCGTGCAAGAGCGTGCAGAAGACAGACCAACAATGTCTTCAGTGGTCTTGATGCTAAGTAGTGAAACTGCATCAATGCCGCAACCCAAAAACCCTGGGTTTTGCCTGGGAAGGAATCCAATGGAAACTGATTCTTCTTCAAGTAGGCAAGATGGAACGTTCACTGTGAACCAAGTCACAGTCACAATGCTAAATGCCAGGTAG | 2574 | 0.4487 | MGRGRGITSLLCFFLFWISKPCTCTTSSDTLTKSQILRTNQTLLSPKGIFQLGFFSPTEDDSTSSLYLAIWYNNIHPKTVVWVANRDAPLQSSTGFLQIAQTGTINIVLTDNNNHSFKSIWSSNQTTQQPPQNPLLQLLDSGNLVLRESNDPSKYLWQSFDYPTDTLLPGMKLGWNLDTNTEKHLTSWKFQDQDPSTGDYSFKMNFHGLPEIFLWNKNKITYRSGPWNGQRFSGVPEMQPVTDSIKFTFHVDEHQVYYTFFIGNESLFSRLLVSSSGELQRLTWIESTQAWNKFWYAPKDQCDYYRECGAYGVCDTNASPVCQCVNGFKPRNPEAWNLRDGSNGCVRKRELECESDGFWKMGNVKLPETTRVFVNRSMGLLECREMCRRNCSCSGYANVEITGGGTGCVTWIGDLFDIRQYPAGGQDLYVRLAASELADIESGDGSHNTAKVVGIIVGATAFVILVLAICFLLWKKRKFPCMLERETVHRGSLERSQDLLMTEVVFSSNREQSSERKIDDLELPLFDFNTLTMATKNFSEENKLGQGGFGVVYKGRLMEGQEIAVKRLSKNSGQGVEEFKNEVKLIVKLQHRNLVRLLGCSIQMDEKVLVYEYLENRSLDGILFDKAKSSSLDWSRRFNIICGIARGLLYLHHDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFNTNQTEANTMRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIIAGKKNRGFYYANAELNLLGHAWKQWKEGNALELIDSSIDNSYSSSEVLRCVQVGLLCVQERAEDRPTMSSVVLMLSSETASMPQPKNPGFCLGRNPMETDSSSSRQDGTFTVNQVTVTMLNAR | 857 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30392g00007 | 857 | CDD | PAN_AP_plant | 351 | 433 | - | - | |
Stsc30392g00007 | 857 | CDD | STKc_IRAK | 544 | 809 | - | - | |
Stsc30392g00007 | 857 | Pfam | PAN-like domain | 353 | 418 | IPR003609 | - | |
Stsc30392g00007 | 857 | SMART | ntp_6 | 353 | 432 | IPR003609 | - | |
Stsc30392g00007 | 857 | Gene3D | Phosphorylase Kinase; domain 1 | 511 | 613 | - | - | |
Stsc30392g00007 | 857 | ProSiteProfiles | Bulb-type lectin domain profile. | 28 | 159 | IPR001480 | - | |
Stsc30392g00007 | 857 | Gene3D | - | 23 | 160 | IPR036426 | - | |
Stsc30392g00007 | 857 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 79 | 229 | IPR036426 | - | |
Stsc30392g00007 | 857 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 659 | 671 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc30392g00007 | 857 | ProSiteProfiles | Protein kinase domain profile. | 538 | 824 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30392g00007 | 857 | PIRSF | SRK | 5 | 857 | IPR024171 | GO:0004674 | |
Stsc30392g00007 | 857 | Pfam | S-locus glycoprotein domain | 222 | 331 | IPR000858 | GO:0048544 | |
Stsc30392g00007 | 857 | ProSitePatterns | Protein kinases ATP-binding region signature. | 544 | 566 | IPR017441 | GO:0005524 | |
Stsc30392g00007 | 857 | Pfam | D-mannose binding lectin | 79 | 189 | IPR001480 | - | |
Stsc30392g00007 | 857 | Gene3D | Transferase(Phosphotransferase) domain 1 | 614 | 821 | - | - | |
Stsc30392g00007 | 857 | SMART | serkin_6 | 538 | 809 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30392g00007 | 857 | Pfam | Protein tyrosine and serine/threonine kinase | 541 | 807 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc30392g00007 | 857 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 11 | 800 | - | - | |
Stsc30392g00007 | 857 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 | 503 | 613 | - | - | |
Stsc30392g00007 | 857 | ProSiteProfiles | PAN/Apple domain profile. | 353 | 433 | IPR003609 | - | |
Stsc30392g00007 | 857 | SMART | blect_4 | 34 | 163 | IPR001480 | - | |
Stsc30392g00007 | 857 | Pfam | Domain of unknown function (DUF3403) | 811 | 857 | IPR021820 | GO:0004674 | |
Stsc30392g00007 | 857 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 614 | 817 | - | - | |
Stsc30392g00007 | 857 | ProSiteProfiles | EGF-like domain profile. | 298 | 334 | IPR000742 | - | |
Stsc30392g00007 | 857 | Pfam | Receptor serine/threonine kinase | 494 | 528 | IPR022126 | GO:0004674 | |
Stsc30392g00007 | 857 | CDD | B_lectin | 34 | 163 | IPR001480 | - | |
Stsc30392g00007 | 857 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 23 | 160 | - | - | |
Stsc30392g00007 | 857 | SUPERFAMILY | Protein kinase-like (PK-like) | 518 | 809 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30392g00007 | Stsc-Chr30392 | 35022 | 41299 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30392g00007 | 526 | 857 | Receptor kinase-like Gene Family | AT4G11530 | 57.270 | 6.27e-132 | 408 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Stsc30392g00007 | PK_Tyr_Ser-Thr | 9.9e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30392g00007 | - | - | gmx:106799702 | 1305.81 |