Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30390g00010 ATGGAGTCCAACGATAACGAGAGTTTCTCATGGGAAGATGTGTTCTGCATTCCTGATGAGTCTGGGCAAAATGAGGCGGAGGACGTTGGAAATGAAGAGACGTGTTTGAATTTGGGTGGTCTATCAGATGAAGATTCGTCGAAATTCGAAGATCTGGTTGGATTGGGGGAAGAGGGCATACTGAACAAGGATGAGGCGGGGATACTTACCAGGAGACGATTCTTTTGTAATAGGGCAGGGTTGAGGGAGGATAAGCATTACCATAGAGCAGAGAGGAAGAGGAACCATAGACCGGAGACACAGACGAATTGCCCTGCCCTGCTATCCGTTTATTTGGATAAAGGATGTGGAAGATGGAGGGTTAGATATGTCATTCTTGGCCACAACCATGACTTGACGCCGAGGGGGATGGTACACATGATCCTGGCCACTGAAGCATGTCCGCTTCAGCAAAGGCTAAGATAG 465 0.4817 MESNDNESFSWEDVFCIPDESGQNEAEDVGNEETCLNLGGLSDEDSSKFEDLVGLGEEGILNKDEAGILTRRRFFCNRAGLREDKHYHRAERKRNHRPETQTNCPALLSVYLDKGCGRWRVRYVILGHNHDLTPRGMVHMILATEACPLQQRLR 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30390g00010 154 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 66 145 - -
Stsc30390g00010 154 Pfam FAR1 DNA-binding domain 66 133 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30390g00010 Stsc-Chr30390 60076 60629 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc30390g00010 FAR1 4e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30390g00010 - - aip:107646477 138.658