Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30389g00011 ATGAAAAATAAAAGGCCAGAAGATGCAGCCCCAATTGATCCTGCAAACATTAAGGCAACACATTATACTTTTCGTGAGCTGGCAACAGCAACAAAGAACTTCCGTCAGGAATGCCTGCTTGGTGAAGGAGGCTTTGGCAGAGTATACAAGGGCGTCATTCCCGCTACCGGCCAGACTGTGGCAGTGAAGCAACTTGACCGGAGTGGTATGAATGGCAATAAGGAGTTTATGGCTGAGGTTTATACGCTGAGTCAGTTGAACCATGAAAACATTGTCAACCTCGTTGGTTATTGTGCTGATGGTGATCAACGTCTATTGGTGTATGAGTTCGTTCAAGGCACTGCTCTAGACAAACGTCTTCTTGAGAACAAAGGGGATCAACCTCCACTAGATTGGTACACCAGAATGAAAGTGGCAGCGGCCGCGGCCAAAGGACTAGAGTACTTGCATGACAATGCCAATCCTCCAATCATATTCAAGGACTTGAAACCCTCTGATATACTACTAGATGGAGACAATAATGCTAAGCTCTTTGGTTTTGGTTTGGGACAGCATGGAAATGACAAGATGAACCTTGCACCTACAAGGGTTATGGGAACATATGGTTACTCTGCTCCTGAGTATGTAAGGACTGGTCAACTCACCTTGAAGTCTGATGTTTATAGTTTCGGGGTCGTGTTGCTTGAGCTCATTACCGGACGCCAAGCGGTAGACACCACAAGGCCAAATGATGAGCAAAACCTTGTTTCATGGGCACAACCCATATTCAAAAATCCAAAGAGATTTCCAGACATGGCAGATCCAAATCTCAACAAAAACTTTCCAGAAAAGGATCTGAACCAAGCTGTTGCAATAGCATCAATGTGCTTACAAGAAGAAGCCGAAGCACGTCCTTTGATGAGTGATGTTGTCACTGCTCTGAGTTTCCTTTCCATTGTTCCTCCTCCAGGGGCTGTGCAGCCTATGCCTATTCAAAAGGCCCCCTCCGTGGATTCCAAGAAGAACTCTAAAGGCAAAGAAAACCATAGCGATAGCGAAAGTGACCGCAGAAGTGAGAGGTCTTACTCCCGTGCAAGCAGCAGGAGAACAATGAGTAGAACGTACAGTTCAGATTCAGATGGAAGCTATTCCTCTAGCAGCTATCTGAGTGATAGCAGCCACTCCGATCGTGAAGTAAGCATCAAGAGAACAAGTAGAAAGCATTCTTCTAGAGACGCTGGCAAAAAGCACAGTAGCAGAAAACATTCTACCAAGGATATAGTAAGCAAGAAGAAGAGCACAAAGAAATCCTCTACTGTTGAAGAAAGCGGTAATAAAAAGTCCTCTGAATTGAAGAAGAAGAGCACGAAGAAATCGTCCAAGAAGGGTCCAGGGCATAATAAGAGCAACAAAAAATCCCCTATGAAAATGTGGAGCGACAAGAGTAGCAAGAAGTCGGACGACGACGAAAGCATTTCCATTAGCAGAAGTAGCAGCAGCGTGATCTCGGAAGATGAGATAATGGAGCACATGGAAAGCAGGGTATCCGGGAATATATCTTTTGGTCTTATAAGCAGCGGGAGCACTAACAGCAACAGATCTGATGAGGAGTAA 1593 0.4501 MKNKRPEDAAPIDPANIKATHYTFRELATATKNFRQECLLGEGGFGRVYKGVIPATGQTVAVKQLDRSGMNGNKEFMAEVYTLSQLNHENIVNLVGYCADGDQRLLVYEFVQGTALDKRLLENKGDQPPLDWYTRMKVAAAAAKGLEYLHDNANPPIIFKDLKPSDILLDGDNNAKLFGFGLGQHGNDKMNLAPTRVMGTYGYSAPEYVRTGQLTLKSDVYSFGVVLLELITGRQAVDTTRPNDEQNLVSWAQPIFKNPKRFPDMADPNLNKNFPEKDLNQAVAIASMCLQEEAEARPLMSDVVTALSFLSIVPPPGAVQPMPIQKAPSVDSKKNSKGKENHSDSESDRRSERSYSRASSRRTMSRTYSSDSDGSYSSSSYLSDSSHSDREVSIKRTSRKHSSRDAGKKHSSRKHSTKDIVSKKKSTKKSSTVEESGNKKSSELKKKSTKKSSKKGPGHNKSNKKSPMKMWSDKSSKKSDDDESISISRSSSSVISEDEIMEHMESRVSGNISFGLISSGSTNSNRSDEE 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30389g00011 530 Gene3D Phosphorylase Kinase; domain 1 1 110 - -
Stsc30389g00011 530 MobiDBLite consensus disorder prediction 315 530 - -
Stsc30389g00011 530 ProSiteProfiles Protein kinase domain profile. 34 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30389g00011 530 SUPERFAMILY Protein kinase-like (PK-like) 20 330 IPR011009 -
Stsc30389g00011 530 MobiDBLite consensus disorder prediction 444 462 - -
Stsc30389g00011 530 MobiDBLite consensus disorder prediction 360 387 - -
Stsc30389g00011 530 FunFam probable serine/threonine-protein kinase RLCKVII 7 110 - -
Stsc30389g00011 530 Pfam Protein kinase domain 36 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30389g00011 530 MobiDBLite consensus disorder prediction 423 443 - -
Stsc30389g00011 530 PANTHER OS07G0668900 PROTEIN 15 311 - -
Stsc30389g00011 530 MobiDBLite consensus disorder prediction 466 485 - -
Stsc30389g00011 530 MobiDBLite consensus disorder prediction 332 359 - -
Stsc30389g00011 530 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Stsc30389g00011 530 FunFam Serine/threonine-protein kinase PBS1 111 316 - -
Stsc30389g00011 530 Gene3D Transferase(Phosphotransferase) domain 1 112 311 - -
Stsc30389g00011 530 CDD STKc_IRAK 40 307 - -
Stsc30389g00011 530 MobiDBLite consensus disorder prediction 401 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30389g00011 Stsc-Chr30389 66664 69183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30389g00011 16 375 Glycoside Hydrolase AT3G07070 60.221 3.16e-154 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Stsc30389g00011 Pkinase 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30389g00011 - - gmx:100807682 491.5