Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30388g00014 ATGCCTTGCGTGGAAGAGGAAGAGGCAGTTGATTTTGATGGTGTATCAAATTCTTCTATTGAGGATGTTATCAGTCACAGTTGTTCTTGTTCAGAAGACAATCATAACAACTCAGATGAGGTAACCCAAGAACCTTTGATTAATGCTGAACTAAAGGACTGGGAAGTATTGCGATTTGGCACATTAGAAGAGGCACGCAAATTTTATTGGCAGTTTGCATCAAAGTCTGGTTTTATTCCAAAAATAAGGACAACCAATTGGGCGACAATAGATGGTACAAGGGTTCCTGTTGGTCAATTATATCACTGCAACAAAGATGGCTATCATCAATCACGGGTAAATGCACCCAAGAAAAGAAAACCAGTTGCATCTGCAAATTGCAAGGCCCGATGTTATGTGGTACAGAATAGGGTTAATGGCTAG 423 0.4019 MPCVEEEEAVDFDGVSNSSIEDVISHSCSCSEDNHNNSDEVTQEPLINAELKDWEVLRFGTLEEARKFYWQFASKSGFIPKIRTTNWATIDGTRVPVGQLYHCNKDGYHQSRVNAPKKRKPVASANCKARCYVVQNRVNG 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30388g00014 140 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 134 - -
Stsc30388g00014 140 Pfam FAR1 DNA-binding domain 67 136 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30388g00014 Stsc-Chr30388 68896 69916 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc30388g00014 FAR1 2.1e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30388g00014 - K16536 ahf:112775207 127.872