Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30388g00008 ATGCAAAAAGATCAAAGTATTGTGTCTATATTTGGCACAAGAGGGACTCCAGGTTATATTGCTCCAGAAATGTTTAGTCGAATGTATGGCGGAGTTTCTCACAAGTCGAATGTATATAGTTATGGTATGCTAATTATTGAAATGATTGGAGGAAAAAAGAATCATGACACCGGAGAATCTCATAGCAGCGAATTGTACTTTCCTGATTGGATTTACAAGGATCTTGAGGAAGGTAATATTCATTCAAGGAGCTTGGCACACGCAGGGGAAGAAAATGGTATTATAATGAAGATGACATTAGTGAGCTTATGGTGCATTCAAATAAATCCATCAAACAGACCATCAATAAGTAGAGTGGTGGAAATGTTAGAAGGACCACTTCAATCAATACCATATCCTCCTAAGCCTGTCGTGTCTTCTCCTGTAGGAACTCCTCTACAATTTTCAGACGCATCTTATAGTTATAACAACAGTGAAAGATTCAACAAGTGA 492 0.376 MQKDQSIVSIFGTRGTPGYIAPEMFSRMYGGVSHKSNVYSYGMLIIEMIGGKKNHDTGESHSSELYFPDWIYKDLEEGNIHSRSLAHAGEENGIIMKMTLVSLWCIQINPSNRPSISRVVEMLEGPLQSIPYPPKPVVSSPVGTPLQFSDASYSYNNSERFNK 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30388g00008 163 Pfam Protein tyrosine and serine/threonine kinase 12 123 IPR001245 GO:0004672|GO:0006468
Stsc30388g00008 163 MobiDBLite consensus disorder prediction 138 163 - -
Stsc30388g00008 163 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 144 IPR045874 GO:0004672
Stsc30388g00008 163 MobiDBLite consensus disorder prediction 142 163 - -
Stsc30388g00008 163 Gene3D Transferase(Phosphotransferase) domain 1 2 133 - -
Stsc30388g00008 163 SUPERFAMILY Protein kinase-like (PK-like) 9 151 IPR011009 -
Stsc30388g00008 163 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30388g00008 Stsc-Chr30388 33133 33624 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30388g00008 2 136 Receptor kinase-like Gene Family AT5G39030 55.714 1.82e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc30388g00008 PK_Tyr_Ser-Thr 2.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30388g00008 - - adu:107486803 210.305