Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30387g00002 ATGTATCCCACAAAATCCTACGGCAAAGTCGATGAATCGGAGCAAGCAATACTCGAATCTCGCCGGAAAACTCGCAGGCGAATAACAATCATAGCTTTGTCCACAATAGTGCTTGTTGCCGTGGTGTGTGCAGCGGTTCTAGGATCGGTCGCACACAACAACGGCAACAATGAGGACGACAACAATAACATCGCTCTTTCAAATTCAGTTAAGGCTGTTTGTGACGTGACATTGTATAAAGAAACATGTTACAGCAGCCTCAGTGCTCTTGTGCACTCATCAGGGAAAGGACAGGTTCTTGATCCGGAGGAGTTGTTCTTCTTTTCAGTTAAAGTGGCATTAGCTGAAGTTTCAAGAGCTTCTCAACATTTCAATGGGCAATTTGGTAATTTCAAAAGGTTGTTGAATAATGGTACTAATCAGAGGGCTCAGGAAGCTTTGAATAATTGCCAAGATCTGTTGGGTCTCACTATTGATCATCTTAATAGCTCCCTGGGTTATTCCTGGCAAAAGTTTTCTTTGGATGATAATTTGGACGATCTTAAAACTTGGTTGAGTGCTGCAGGCACTTACCAGGAGGCATGTATTGATGGTCTTGTTGATGAGGGAAATGAATCATTGAAGACAAGCATTGTAAGCTATCTCAAAAACTCAACACAGTTGACAAGTAACAGCCTTGCCATCGTTACATGGATTAACAAGGCTGTAACCACAATCAACTTGAACAAGAGGCGGCGCCGCTTGTTGAGTTTATGGAATAGTAATGGCCGGAAGCTATTGCTTCAGAATAATAATGACTACTTGAAGGTGAAAGCTGACATTGTTGTCGCGAAAGATGGAACTGCTAAATATAAGACGATTTCGGCTGCGCTTAAACACGTTCCTGAAGAAAGTCAGAAGAGAACTGTGATCTATGTCAAGAAAGGGATTTATTATGAAAATGTTAGGGTGGAGAAGAACAAATGGAATGTCATGATCATTGGTGATGGAATGAATGCCACTATTGTGTCTGGTAGCCTTAACTTTGTGGATGGCACCCCAACATTTTCAACTGCAACATTTGCTGTGTTTGGAAGAAATTTCATTGCGAGAGAGATTGGGTTCAGAAACACAGCAGGTCCACAGAAGCACCAGGCAGTGGCACTACTAACAACTGCAGATCAAGCAATTTACTACAGATGCCTAATTGATGGATTTCAAGATACACTCTATGTTCAGGCAAATCGTCAATTCTACAGAGAATGCAACATTTATGGCACTGTGGATTTAATATTCGGAAACTCAGCTGTGGTGATTCAAAACTCCAATATTGTTCCAAAGGTCCCCATGCAAGGGCAGCAGAACACAATCACAGCACAAGGGAAATCTGATCCGAACATGAACACCGGAATCTCCATCCAGAACTGCAGCATTGCGCCTTCTTCTGCCGATTTGAATTCCGTCCAAACCTACTTGGGCAGGCCATGGAAGAACTACTCAACCACCGTTTTCATGCAATCAACCATTCAAAGTTTCATTGATCCCAAAGGGTGGTTACCATGGGTAGGAAACTCAGCACCAGACACCATATTTTATGCTGAGTTTCAGAATATTGGACCAGGTTCTTCAACAAAGAATAGGGTGAATTGGAAGGGTGTGAAATCTGCCATTAACAACAAACAAGCTAACTTATTTACCGTTAAAGAATTTATTTCCGGGGATAGATGGATTCCGGCCACCAGTGCGCCATTTAAATCTTCTCTCTGA 1746 0.4227 MYPTKSYGKVDESEQAILESRRKTRRRITIIALSTIVLVAVVCAAVLGSVAHNNGNNEDDNNNIALSNSVKAVCDVTLYKETCYSSLSALVHSSGKGQVLDPEELFFFSVKVALAEVSRASQHFNGQFGNFKRLLNNGTNQRAQEALNNCQDLLGLTIDHLNSSLGYSWQKFSLDDNLDDLKTWLSAAGTYQEACIDGLVDEGNESLKTSIVSYLKNSTQLTSNSLAIVTWINKAVTTINLNKRRRRLLSLWNSNGRKLLLQNNNDYLKVKADIVVAKDGTAKYKTISAALKHVPEESQKRTVIYVKKGIYYENVRVEKNKWNVMIIGDGMNATIVSGSLNFVDGTPTFSTATFAVFGRNFIAREIGFRNTAGPQKHQAVALLTTADQAIYYRCLIDGFQDTLYVQANRQFYRECNIYGTVDLIFGNSAVVIQNSNIVPKVPMQGQQNTITAQGKSDPNMNTGISIQNCSIAPSSADLNSVQTYLGRPWKNYSTTVFMQSTIQSFIDPKGWLPWVGNSAPDTIFYAEFQNIGPGSSTKNRVNWKGVKSAINNKQANLFTVKEFISGDRWIPATSAPFKSSL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30387g00002 581 PANTHER PECTINESTERASE 35 573 - -
Stsc30387g00002 581 FunFam Pectinesterase 267 581 - -
Stsc30387g00002 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 68 232 IPR035513 -
Stsc30387g00002 581 Gene3D - 267 581 IPR012334 -
Stsc30387g00002 581 SMART PMEI_2 65 228 IPR006501 GO:0004857
Stsc30387g00002 581 FunFam Pectinesterase 66 233 - -
Stsc30387g00002 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 234 IPR035513 -
Stsc30387g00002 581 CDD PMEI-like_3 72 234 - -
Stsc30387g00002 581 Pfam Pectinesterase 273 567 IPR000070 GO:0030599|GO:0042545
Stsc30387g00002 581 NCBIfam pectinesterase inhibitor domain 57 232 IPR006501 GO:0004857
Stsc30387g00002 581 SUPERFAMILY Pectin lyase-like 270 577 IPR011050 -
Stsc30387g00002 581 Pfam Plant invertase/pectin methylesterase inhibitor 69 228 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30387g00002 Stsc-Chr30387 20871 24629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30387g00002 7 581 Carbohydrate Esterase AT3G10710 55.575 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30387g00002 - - gmx:100808802 780.4