Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30386g00009 ATGGTGTTTGAGAAAACAAGATCTGTGAGATTTCAAGATGATGGTGAGCTACCCAAAATCTCAAGAGCTAATGGTGACAATGGAATCAAGCTACCTAATTCCAACAAAGATCTCAACAACAGAGAAGCAAGGAAAGCAAAGAAGTTCTTGAAAGCCAGAGTGTTATCAAGAGTGTTCTCAGAGGACTATGAAAGAGTAAGAAGAAGAATCTTAGACCCTAGAGGGCAAACCATTCACAGATGGAACAAGATTTTCTTGGTAGCATGTTTAGTTTCTTTGTTTGTGGATCCTCTATTCTTTTACTTGCCACTAGTTCAACATGAAGTCTGCATTGGTATTGGAACAACACTTGAAGTGATCCTCACTCTTATCAGATCAATAGCAGATGCATTCTACATGATTCAGATCATCGTGAGGTATCGAACGGCTTATGTCGCGCCTTCTTCCCGTGTTTTCGGCCGAGGAGAGCTTGTTATAGACCCTGCAAAGATAGCAGCTAGGTACTTCTTCAAAGGTTTCGGGCTAGACTTTGTTGCCGCCTTGCCCCTTCCTCAAGTAAGTCACTGA 567 0.4198 MVFEKTRSVRFQDDGELPKISRANGDNGIKLPNSNKDLNNREARKAKKFLKARVLSRVFSEDYERVRRRILDPRGQTIHRWNKIFLVACLVSLFVDPLFFYLPLVQHEVCIGIGTTLEVILTLIRSIADAFYMIQIIVRYRTAYVAPSSRVFGRGELVIDPAKIAARYFFKGFGLDFVAALPLPQVSH 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30386g00009 188 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 51 186 - -
Stsc30386g00009 188 SUPERFAMILY Voltage-gated potassium channels 72 185 - -
Stsc30386g00009 188 Pfam Ion transport protein 81 185 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30386g00009 Stsc-Chr30386 78001 78662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30386g00009 48 186 Ion Channels AT2G28260 74.820 1.62e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30386g00009 K05391 - gmx:100791992 256.529