Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30385g00007 ATGGCAACCGCAACATACCCGCCGCCCCCACCATTCTATAGGCTTTACAAAGATTACTTGGAGGACCCTAAGTCTGCTCCAGAGCCTCCTCCTCCTATAGAAGGGACCTACGTTTGTTTTGGGGGCACCTACACTACTAGTGATGTTTTGCCAAGCTTGGAAGAACAAGGGGTGCGCCAACTCTATCCAAAGGGGGCTAATGTTGACTTCAAGAAGGAGCTGAGATCACTGAATGGGGAATTGCAGCTACACATTTTGGAGCTTGCAGATATTCTTATTGAGAGACCATCACAGTACGCGAGGAGAGTTGAAGAAATTTCGACTGTATTCAAAAACTTACATCACCTTTTAAATTCCTTGCGGCCTCATCAGGCAAGAGCAACATTAATTCACATTTTGGAACTTCAGATTGAGCGCCGTAAACAAGCAGTGGAGGACATAAAGAGGAGAAGAGAAGAGGCACGAAGTCTACTTAACGAGTCCCTAGCAACACTTGATGGCCAATAG 507 0.4615 MATATYPPPPPFYRLYKDYLEDPKSAPEPPPPIEGTYVCFGGTYTTSDVLPSLEEQGVRQLYPKGANVDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIERRKQAVEDIKRRREEARSLLNESLATLDGQ 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30385g00007 168 Coils Coil 130 164 - -
Stsc30385g00007 168 SUPERFAMILY Mediator hinge subcomplex-like 67 159 IPR037212 GO:0016592
Stsc30385g00007 168 Gene3D - 62 159 IPR044888 -
Stsc30385g00007 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
Stsc30385g00007 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30385g00007 Stsc-Chr30385 59440 66436 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Stsc30385g00007 Med7 3.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30385g00007 K15148 - gmx:100792250 296.204