Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30384g00009 ATGTCTTCGTCTTCGTCGGCGGCGGCGGCGAACAATTCGCCGTGCGCGGCGTGCAAGATTCAGCGGCGGAAGTGCACACAGGAGTGTGTGTTCGCGCCGTACTTCCCGCCGGATAACCCGCAGAGATTCGCGTACGTTCACAAGGTGTTCGGAGCAAGTAACGTAGCGAAACTCCTGAACGACCTGAACGCGGCGCAGAGGGAGGACGCCGTGAAGTCTCTGGCGTACGAGGCGGAGGCGCGTCTGCGTGACCCCGTGTACGGTTGCGTAGGCCTCATCTCACTCCTCCAGCACAAGCTCAAACAGCTCCAGGCTGAGCTTAACCACGCCAAGACGGAACTCGCAAACTACGCTGTCGTTAACAACAACAATAACAATAATAATAACGGCTCTCCTCACGCTCCTGTTCTCCCGCTCTTTAACAGCCAACATCATCACCAGCAACCGCCTCAACTGAATCGTAACAACCTCTCTGCTCATCATCACTCTCCGCAACCGTTTTCTGTTTCTGTTTCTCCCTTTCAGGAGGTTGTTATGCAGCATCAGCAAGATCTTTTGGGGTTTGAGAACTACATGGCGGTTGGTGGTTCTTCTCCTGCTGCTTCTGCTGTTTCACCTTCCCTGGCTCTCGGACCTGTTGATCACAGTTTTCACCACCATCATCACCATAATCTGCAGCAGCAGCTTCAGGCGCATCATCAGTCTTTCATGTTTCAGAAGCAGGCAAAGTTTGAAGGCGAGGAGGGTAGGAATAGCAGGAGGACCGGTCCTTCTTGTTGCTGA 783 0.539 MSSSSSAAAANNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNDLNAAQREDAVKSLAYEAEARLRDPVYGCVGLISLLQHKLKQLQAELNHAKTELANYAVVNNNNNNNNNGSPHAPVLPLFNSQHHHQQPPQLNRNNLSAHHHSPQPFSVSVSPFQEVVMQHQQDLLGFENYMAVGGSSPAASAVSPSLALGPVDHSFHHHHHHNLQQQLQAHHQSFMFQKQAKFEGEEGRNSRRTGPSCC 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30384g00009 260 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Stsc30384g00009 260 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Stsc30384g00009 260 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 155 - -
Stsc30384g00009 260 Coils Coil 93 120 - -
Stsc30384g00009 260 MobiDBLite consensus disorder prediction 123 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30384g00009 Stsc-Chr30384 76884 77666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30384g00009 9 167 AS2 family AT5G66870 60.000 2.25e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc30384g00009 LOB 2.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30384g00009 - - adu:107460830 415.616