Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30382g00009 ATGACAAACACTTCTCAAGTTGTGACATGCAAAGGTGCAGTATGTTGGAAGGTTGGAGAAGCTGTGAAGATTGAAGAGATTCAAATTGATCCACCAAAAGCAAATGAAGTTCGACTTAAGATGCTTTATTCCAGCATCTGCCATACTGATATCTCAACCATTCAAGGATCTGCTGGCTTTAAGTTTTATCCTCTAGCACTTGGACATGGAGGAGTTGGTGTTGTAGAAACTGTTGGGGATGAAGTCAAGAATCTAAAAGAAGGGGATATGGTGATTCCAACATACATAGGAGAGTGTCAAGAATGTGAGAATTGTATTTCAGGAAAATCAAATTTGTGCTTGACATATCCTATGAGACTGTGTGGCTTGATGCTAGATAACACTTCAAGGATGTCCTGCAGAGGCCAGAGGCTATACCACCCTTTCAGTTGCGCCACGTGGTCCGAGTACACGGTTATCGATGTTAACTACCTTGTGAAGGTTGATCCAAGCATGAATCCAACCCATGCCAGCTTTATCTCATGTGGATTCTCAACTGGCTATGGAGCTGCATGGAAGGAAGCCAAGGTTGAAAGTGGATCAAGTGTTGCTGTTTTTGGTCTTGGTGCTGTTGGATTAGGGGCTATAAGTGGAGCGAAAATGTTGGGGGCAACTAAGATAATTGGGATTGACACAAATGAAATGAAGAGAGAAAAAGGTGAAGCTTTTGGAATGACTCACTTTATAAATCCAAGTAATTCTGATAAATCTCCTTCAGAATTGGTCAAGGAACTAAGTGATGGAATGGGTGTGGATTATTCATTTGAGTGCAGTGGAGTTGGCCCTTTGCTCACTGAGTCAGTAGAAGCTACAAAAGTGAACTTTGAAAGGATCAATTTTTGGTGGGTTAAAAATCACATCAGACCTACCCATCATAGCTGA 921 0.4159 MTNTSQVVTCKGAVCWKVGEAVKIEEIQIDPPKANEVRLKMLYSSICHTDISTIQGSAGFKFYPLALGHGGVGVVETVGDEVKNLKEGDMVIPTYIGECQECENCISGKSNLCLTYPMRLCGLMLDNTSRMSCRGQRLYHPFSCATWSEYTVIDVNYLVKVDPSMNPTHASFISCGFSTGYGAAWKEAKVESGSSVAVFGLGAVGLGAISGAKMLGATKIIGIDTNEMKREKGEAFGMTHFINPSNSDKSPSELVKELSDGMGVDYSFECSGVGPLLTESVEATKVNFERINFWWVKNHIRPTHHS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30382g00009 306 Pfam Zinc-binding dehydrogenase 203 285 IPR013149 -
Stsc30382g00009 306 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Stsc30382g00009 306 Gene3D - 2 192 - -
Stsc30382g00009 306 Gene3D - 193 300 - -
Stsc30382g00009 306 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 292 - -
Stsc30382g00009 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 286 IPR036291 -
Stsc30382g00009 306 SUPERFAMILY GroES-like 4 191 IPR011032 -
Stsc30382g00009 306 FunFam alcohol dehydrogenase 1-like isoform X1 18 179 - -
Stsc30382g00009 306 PANTHER ALCOHOL DEHYDROGENASE 6 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30382g00009 Stsc-Chr30382 66059 68361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30382g00009 35 263 Monolignol Biosynthesis Gene Families AT4G37980 28.571 4.31e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30382g00009 K00121 - gmx:100798341 441.039