Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30382g00007 ATGGCTGAACGCCCCGGAGGATTTTGCAATGTGTTTGAAAGCAAGACGGAAAGATTTTATGGATTAGTGCTTGCAAGGTGTTTGCTCTTATGTTTGCAAGAGTTAGGATGGATGATAGTTGTTAATGTAGTTTGGAATTACCTCCTAGATGATTTCAGCATTGAGAGTGTGTTTCTGCACGCTAGGGCCTCAAGTTTGATCAACCATGATGTTCTGGAGAACTGGTTGAGGTATTACAAGAATCAGGAAAAAAGGTCTGTCAAACATTCTATGATCCAGAACCCTGATATGAAACTTGAATCAGGGACTTGTAATATTTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAATCGAGCTCTAACTGGAACAAAGGCTGAAGAATTCTCTGATGAAAATTGTCGCTCAGGGGAGCCCGGTCAGCTTTCTATGGATGTGGATGATCTATCTTCTCATAGGAATACAGCTTGTGGAATAATGAAGCATGCTGTCAGTGAAACCAGTAACTTGCTTACTGTTAATTCCGGTCATGAATCTCTGTCGGAAAATGCTGAAACCACGCAAACTTTATCAGAGAAGTATCATGATGTCAAGTGTTTAGAAGGACCTGATGATAGCTCTTCTTGTATCAGTAGAAACAGTAATGCTAATTTAGTTAGTGATAGCCATCAAAGTAATGCAGACAAAATAAATATTTCTTGTAGTTCACCCTCAGCTGGTAACGTAGGAGCAGAAGGATCTACAAGTGGACCATCTGTTTATATATCTGGCTTGTGTGAGATGCCCTCTTCTAAAGATGCAGATATGCCAGAGAATTTATCAGAATGCTGTGTTGGAAATGTTGAGTCATCACCAAGCAAGGAGATTGTAACTGCTAATTTTTCCAGTGAAAAATCTCTTAAAGATAATGATGGTCTTGTTAATGGCATTACTAGCAAGGTTTCAGCAAAAGTATATCCAAAGTCAGAAACAGATAGTGACAATGATGTTGGTGATGTGAAAGACGAAGGTCATAAAGTTCCAGTCCATGATGGACTGCACCAGAAGCAGGGGGAGCTTGTTAAATCACCCGTCAAGCCTGAAGCTCAATCTGGAGATGAGAGCGATGACTCAGATGTTGAGCATGATGTAAAGGTATGTGACATTTGTGGAGATGCTGGTCGCGAGGAGCTACTTGCAATATGTAGTAGATGCAGTGATGGTGCAGAGCACACCTATTGCATGAGAGAAATGCTCGAAAAGGTCCCAGAAGGAGACTGGTTATGTGAAGAATGCAAGTATGCTGAGGAGACTGAAAAACATGGGCTGGATGTTGAAGAGAAAAAGATCCATAAAGTTAGTTCAACTGCACAAATCTCTGGTAAAAGGCCTTCTGAGAGTGAAGAATTGGCAAAGGCAGGTAAAAAGCAAGCTCTTGAATCAAGCAAAGGGTCACCAAAGGGTTCAAGCCCGAAGAAAATATTTCCACTGTCGCGAGAGTCTTCCTTCAAGAACATAGACAAAGGAAAGTTGAAGTCTGATCATCAGACCTCTATTTGTAACCACCCCGATGGCAATGACATAGAACTTGCTCGTTCTCTTTCTGCTGGTCCTCGGAGTCAAACAAATAAGAGTACATTGTTAAAGTCTAATTCTTTCAACACCATCAATTCGAAGCCCAGAGTCAAACTTGTTGATGAAGTCCCGCAAAAAAAGAAAGGGGCTGGTGAACATACCTCTAAGAATATTGAGATGCCAGGACGAATGATAAGCAAATCTACTTCATTGAAATCCTCAAATTTGGGCCGTTCATGTGCCACTGAATCAAAAGTCAAAATGGTTACTTCAAAACCTGGAACTACTGTGGATCAAAAAGGATCTAAACTAGCAAAAGAATCAGGTGCCTCTGAGAGGAAAGTTTTCTCTAGGGTTGATCGGCCTGTTGTTTGTTCAACCATGGCTAGTTCTGCTGTTCTGACATCTAAGAGTGATCAGAAGCTTACCCCTCGTAGCGAAACTGCTAAACCTTCAGCAATTAACAACAATCGTGAATTTAAGGTCAACCAAGATGGGAGATCAAATTCATTATTGAAGTCTAAGAACAATATAAGCCAGAGAACATCAAAAAATGGTGATGAAACTCAATTAGCTGGGCTGCCTCAATCAAGAGAGATAGCATATCAGGTTGATAAAGCCAAAGATAGTTCTGGTGATTGTGTGAGGTCTGGTGTTACTAATGCTTCTGAAAGCCCATTCTGTCACAAATGTAAGGATTATGGCCATGCTACAGAAGGTTGCACGGTTGATAAACAGGAATTTGGCCTTGAAGGATCAGCCACTGCTCCAAACGGTTCAAAAGACGAAACACATAAAGATAATAGACTGAAAGCTGCAATCCAGGCAGCTTTACTTAGAAGGCCTAAAATATGCAAGAGGAAAGAATTACCTGCCCAAACTGAGGAGGTTCTTAAATCAGCCACAGACATGAAGTCTGAAGTCACTTCTCAAGATAAGGTGTTTGTTATTGACACACCAAAGAATATTGTTTCTACTGAAGAAACAAAAGTGAGGCAGGAGATCCTTCAGAATCCTACTTTTGAAACTTCGTCTTCCAATGATTTGAAGCAACATGGCTTTTGTCTAGCTGATTTTGGATTACAACCTAGAAAGCTAGAATCTGTTGGTCCACCTACTGGAATTCCCGTGGTTAGAGACCTTCGCAACCAAGCTTTGGCCGTCTCAAGAGTTCTTCCAAAGATATCAGTGTTTCCAGAATATGAATACATTTGGCAAGGTGTCTTTCGAATGCATAGAAGTGGAAAGCCCCCTGACTTATGTACTGGTATTCAAGCACATTTATCCACATGTGCTTCCCCTAAGGTTCTTGAGGTAGTGAACAAGATTCTACCCGAGGTTTCCCTCAATGAAGTTTCTCGCTTGAGCACATGGCCTACACAATTTCATCAAGGCGGGGCTAGGGAAGATAATATTGCTCTTTACTTTTTTGCCAAAGACATTGAAAGTTATGAGAGACACTACAAGGGTCTGTTGGATCACATGATTATAAATGATTTAGCGCTTAAAGGAACTTTTGATGGCGTTGAACTTCTTATATTCCCATCCAATCAGCTTCCTGAAAATTCTCAGCGTTGGAATATGTTGTTTTACTTATGGGGCGTATTTAGAGGGCAGAGAATGAATCATTCTGATTCTGCAAAAAATATTTGTAATCCCAGTTTGAATGCTTTGCCAGTTCAGAAGGATTTTCCAACTGCTGTGATGACTTTGTCTGAAACCCACTGCTCATCGAAGCGGATGGATGAACAATCAATTGCTTGTGGTAAAACCTGCAGTGAAGTTCTCTCATCCACCTCCATGGACCAAGGCCATAATATTTTAAGTGGGAATTTTGATATTAAAGAAAGTATTTTTGACCAGGCACGTTTGGGTTCACAGGTAAACTTACAGAGACAAGATAGTAGAATCAACACGGAATCTGCATCCAAGAATCCAACAAGCAGTGAACAATTGTGCCAAGAAATGCACACTCCGGGTTCGCCCCTGAAAGATGGACAACACAGAGTCCCCACACCTCCTGAAGCAATGGGAACGCATGTAAGTAGCAGGATTGTGGAAACAAACAGTGATTGTGATATTTCAGTCAGGCTGGAGAACTCTCTGTCTTCTGGGATTCCTTCTGCTGGCAAACAAGAGATCGATGCGGCAAGCATTACCTCAAAGAATCAAAATTCAGAAAGAACTAACAATGATGAAGATCAAAGAAGGCCTAAAAGAAAACTGATAGAAGAAGATCTCAATATTAACATGGAGGCGACCCTTCAAGAAGACCCGACTATAAGAGGCATCAATTGTGAGCAAACTAGTGATAATAGAATACAGCATATAGATGTTTCAGATGCAGTTTTGAAGGCTTCCGAAGATAGATATCAGAAATTGCATTGGGATAAGGTGAATGGAAAATTGGAAGATGGAGAAAGTTCCAGCAAGAAGCTCAAGTCAGGTTTCAGTGATATGATTGGAAGCTGCAGTTCAGGAGGTAGGGAATCTTTCAATGGCAGTTTTACAGCCCTTGCAAACCACCCAAGTACCTTGTCTTCAGTTGAGGGTACAGGATCCAAAGAAGCTTGCTTGGATAAAGTCATTCAAGAGGACCTTGGAACTGCGGAAAGAACCTTCTTTCCTGTCGGTTTGCATCAGAAAAATGACTCGCAATGGATGCTTAATGGGATGCCACTGGAGGGGCCTTGTGAGCATGAGGGTCATTTTCAAGTAGGGATTCCAAATCTAGAACTTGCTTTGGGGGGTGAAACAAAACCACAGCCACCGCCAGCACCGCCACTACCACCGCATAAGGGTATGTTCCCTTTTCTTGCTGGGGCTGTAGACAATAAACATAACCAGGAAAAACCACCTAAAGTAGCGGCGGATGAGCAAGAGGGTGATGACAATGTTGCTGCATCACTTTCCCTGTCTCTATCATTCCCATATTTGAATAAGGAATCTGTCAAACCTGCTCCAAAAGCTGAAGATTCGGCTGATGGGAATGTGAATACTTCGTTTCTCCTTTTTGGGAGATACACAGACAAATAA 4590 0.4157 MAERPGGFCNVFESKTERFYGLVLARCLLLCLQELGWMIVVNVVWNYLLDDFSIESVFLHARASSLINHDVLENWLRYYKNQEKRSVKHSMIQNPDMKLESGTCNICSAPCSSCMHLNRALTGTKAEEFSDENCRSGEPGQLSMDVDDLSSHRNTACGIMKHAVSETSNLLTVNSGHESLSENAETTQTLSEKYHDVKCLEGPDDSSSCISRNSNANLVSDSHQSNADKINISCSSPSAGNVGAEGSTSGPSVYISGLCEMPSSKDADMPENLSECCVGNVESSPSKEIVTANFSSEKSLKDNDGLVNGITSKVSAKVYPKSETDSDNDVGDVKDEGHKVPVHDGLHQKQGELVKSPVKPEAQSGDESDDSDVEHDVKVCDICGDAGREELLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYAEETEKHGLDVEEKKIHKVSSTAQISGKRPSESEELAKAGKKQALESSKGSPKGSSPKKIFPLSRESSFKNIDKGKLKSDHQTSICNHPDGNDIELARSLSAGPRSQTNKSTLLKSNSFNTINSKPRVKLVDEVPQKKKGAGEHTSKNIEMPGRMISKSTSLKSSNLGRSCATESKVKMVTSKPGTTVDQKGSKLAKESGASERKVFSRVDRPVVCSTMASSAVLTSKSDQKLTPRSETAKPSAINNNREFKVNQDGRSNSLLKSKNNISQRTSKNGDETQLAGLPQSREIAYQVDKAKDSSGDCVRSGVTNASESPFCHKCKDYGHATEGCTVDKQEFGLEGSATAPNGSKDETHKDNRLKAAIQAALLRRPKICKRKELPAQTEEVLKSATDMKSEVTSQDKVFVIDTPKNIVSTEETKVRQEILQNPTFETSSSNDLKQHGFCLADFGLQPRKLESVGPPTGIPVVRDLRNQALAVSRVLPKISVFPEYEYIWQGVFRMHRSGKPPDLCTGIQAHLSTCASPKVLEVVNKILPEVSLNEVSRLSTWPTQFHQGGAREDNIALYFFAKDIESYERHYKGLLDHMIINDLALKGTFDGVELLIFPSNQLPENSQRWNMLFYLWGVFRGQRMNHSDSAKNICNPSLNALPVQKDFPTAVMTLSETHCSSKRMDEQSIACGKTCSEVLSSTSMDQGHNILSGNFDIKESIFDQARLGSQVNLQRQDSRINTESASKNPTSSEQLCQEMHTPGSPLKDGQHRVPTPPEAMGTHVSSRIVETNSDCDISVRLENSLSSGIPSAGKQEIDAASITSKNQNSERTNNDEDQRRPKRKLIEEDLNINMEATLQEDPTIRGINCEQTSDNRIQHIDVSDAVLKASEDRYQKLHWDKVNGKLEDGESSSKKLKSGFSDMIGSCSSGGRESFNGSFTALANHPSTLSSVEGTGSKEACLDKVIQEDLGTAERTFFPVGLHQKNDSQWMLNGMPLEGPCEHEGHFQVGIPNLELALGGETKPQPPPAPPLPPHKGMFPFLAGAVDNKHNQEKPPKVAADEQEGDDNVAASLSLSLSFPYLNKESVKPAPKAEDSADGNVNTSFLLFGRYTDK 1529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 496 510 - -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 1465 1479 - -
Stsc30382g00007 1529 SUPERFAMILY FYVE/PHD zinc finger 367 431 IPR011011 -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 1146 1174 - -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 1438 1452 - -
Stsc30382g00007 1529 ProSiteProfiles Zinc finger PHD-type profile. 377 428 IPR019787 -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 579 620 - -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 1220 1244 - -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 447 548 - -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 528 548 - -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 1433 1485 - -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 561 631 - -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 1146 1200 - -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 320 350 - -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 319 373 - -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 1220 1258 - -
Stsc30382g00007 1529 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 318 440 IPR013083 -
Stsc30382g00007 1529 SMART PHD_3 379 426 IPR001965 -
Stsc30382g00007 1529 MobiDBLite consensus disorder prediction 651 708 - -
Stsc30382g00007 1529 PANTHER - 377 1084 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30382g00007 Stsc-Chr30382 53845 60715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30382g00007 376 437 C2H2 Transcription Factor Family AT3G01460 32.258 7.21e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30382g00007 - - adu:107477384 1930.22