Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30382g00006 ATGATACAGAACGCTGATATGAAACTCGAGTCAGGGACTTGTAATGTTTGCTCATCTCCTTGTTCATCTTGCATGCATCTTAATCGAGCTCTCACTCGATCAAAGGCCAAAGAATTCTCCGATGAAAATTGTCGCTTAGGGGAGGCCAATCAATCTTCTACGGTTGAGGGTGATCAATCTTCTCATAGGAGCAGAACTTGTGAAAGATTGAATCATGCTAGTAGTGAAACCGGTAACATGCTTAGCGTTAATTCCAGTCATGAATCTCTGTCTGAAAATGCTGAAAGCACACGACCTTTATCAGAGAAGCACCAGGATGCTAAATGTTTAGAAGGTCTCGATGACAACACTTCTTGTATCAGTAGAACCAGTAACGATGATTTTGTTATTAATGACAATACTGGTGTGCTTTCGACAAGAGTATATCCAAAGTCAGAATCAGATTCAGATAGTGATGTTGGTAATGTGAAAGACAAAGATCATAAAGTTCCAGTCCGTGATGGACTGCGTGAGAAGCAAGGGGAACTGGTTAAATCAGCAGTCAAGCCTGAAGCTCATTCTGAAGATGAGAGTGATGACTCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAGGAGCTACTTGCAGTATGTAGCAGGTGCAGTGATGGTGCAGAGCACACCTATTGCATGCGAGAAATGCTTGAAAAGGTCCCAGAAGGTGACTGGTTATGTGAAGAATGCAAGTATGCTCAGGAGGCTGAAAATAAAAGGCTGGCTGCTGATAAAATAGTTCATAAAGTTAGTTCAACTGCACATATCTCTGGAAAAAGGCCTCTTGAAAGTGAAGAATTGGCTAAGGCAGCAAAAAGGCAAGCTCATGAGTCAAGCATTGGGTCACCAAAGGGTTCAAGCCCCAAGAGAATATTTCCACTGTCACGAGAGTCTTCATTCAAGAACCATGATAAAGGAAAGTTGAAGTCTGGTGACCACTCCTCCATCTGTAATCACCCTGATGGCAATAACCGAGAACTTGCTCGGTCTCTTTCTGCTGGTCCTCGAAGTCAAACAGCAAAGAGTACTTCGTTAAAGTCAAATTCGTTCAATATCAATTCCAAGCCAAGAGTCAAACTTGTCGATGAAGTCCCGCAAAAGAATAAAGGGGGTAGCGAACAAGGCTCTAAGAATATTGAGACACCAGGACAAATGATGAGCAAATCTACATCATTGAAATCCTCGAATTTGAGCCGTTCAAGTGCCACTGAATCAAAAGACAAAATGCTTACTTCTAAGTCTGGAACTACACCGGATCTGAAAGGATCTAGACTGACAAAAGAATCTGAAAGGAAATTTCTCTCTAGGGTTGATCGGCCTATCGGTTGTTCAACCATTTCCACACCTAAAGGTGACCAGAAGCTTTCTGCTCGTGGTGAAACTGCTAAACCTTCTGCAGTTAGTAATCGAGAGTGTCAGGTCAACCAAGATGGGAGGTTAAACTCGTTATCTAAGAATAATATAAGCCGCAAGAGTTTGACCCCTCTAGTTAGTGCAGAAAGTACAACCAGTGGTGATGAAACTCAATCGGATGGGCCGCCTCAATCAAGAGAATTGGCAAATCATGTTGATAATACCAAAGATAGTTCTAGCGATCATGTGAGTCCTGGTGAGAGCCCATTATTTCACAAAAGTAAGGATTTCAGCCATGCAACAGAATGTGTGGTTGCTAATACACAAGAATTCGGCCTTGAAGGATCAACCACTGCTCCATACGGTTCAAAAGATGAGATACATAAAGATAATAGACTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATATGCAAGAAGAAAGAAGTACCTGTTCGAACTGATGAATTTTCTACATCAGGCACCGACTTGAATTCCAAAGTCAGTTTTCAAGATCAAGCGTTTGTTATCAACACACCAAAGAATATTCTTTCTACTGAAGAAACAAAAGCGAGGCTGGAGATCCTTTACAGCCCAACATTTGAAACTTCTTCTTCCAATGGTTCAAGGCCAGTTAGCTTTTCTCCAACTGATTCTCATTCACAACCAAGAAAGTTAGAATCTGTTTGTCCTGATCCTGGCAAGCCTGTAGTGAGAGATCTCCACAATCAAACTTTGGCCGTCTCAAGTTTTGTTTCACAGATATCAGCCTTTCCAGAACATCAATACATCTGGCAAGGTGAATTTCGAGTGCATAAAAATGGAAAGCTACCTGACTTGTATACTGGAATTCAAGCACATTTATCCACAGGTGCATCCCCTAAGGTTCTTGAGGTAGTGAACAAGTTTCTACCTGAAGTTTCCCTGAATGAAGTTTCTCGCATGAGCACATGGCCTTCCCAATTTCATCAACGCGGGGCTAGGGAAGATAATATTGCTCTTTACTTTTTTGCCAAAGACATTGAAAGTTACGAGAGACACTACAAGGGTCTACTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGAATTTTCGATGGTGTTGAGCTTCTCATATTCCCATCCAATCAGCTTCCTGAAAATTCTCGGCGTTGGAATATGCTATTTTTCTTATGGGGTGTTTTTAGAGGACAGAGGATGAATCATTCCGACTCTGCAGGAAAGGTTTGTATTCCCAGTTTGAACGCGGTGCCAGTTGAGAAGGATTTTCCAACTCCTGTCACGACTTTGTCTGAAACCCACAGCTCACTGAAGCCAATGGATGGACAATCAATCGCTTGTGGTAGGACATGCAATGCGGTTCTACCGCCCACTTCCATAGATGAAGGCCATACTATTTTCCATGGGAATTTTGATATCAAAGAAACTAGTTGTGACCAGACATGTTTGGGTTCACAAGTAAACTTACATAGTCTAGATAGTAAAATCAACACTGAATCTACGTCAAAGATTCCTTCAAGCAGTGGTCAGTTGTGCCAAGAAATGCATTCCACAGGTTCATCCCTGAAAGATGGACAATACAGAGTCTCCATACCTCCTGAACCAATGGGAACAGTTTTAAGTAGTAGGATTGTGGAAACAAATAGTGATTGTGATATTTCAGTCAAGCAAGAGAAACAAGAGATTGATACTGCAAGCAATACCTCTAAGAATCAAATTTCAGAGAGAATTAACCATGATGAAGATCAACAAAGGCCTAAAAGGAAATTGATAGAAGAAGATCTCAATATTAGTGTAGAGGCAACCATTCAAGAAGACCCGACTAGAAGAAGCATAAACTGTCAAGAAACTAATGATAAGAAAGTTCATCATATAGATGTTCCAGATGCAGCTTTGAAGGCTTCTGCAGATAGTTATCAGAAGTTGCCTTGGGATAAGGTGAATGGAAAATTGGAAGGTGGAGAAAGTTCCAACAAGAAGCTCAAGTCAGGTTTAAGTGATATTTATGGAAATTGCAGTTCAGGAGGTAGGGAATCTTTCAATGGCAGTTTTACAGCCCTTGAAAACCATCCCGGTACCTTCTCTTCAGTTGAGAGTAGAGGATGTAAAGAAGCAAGCTTCGATAAAATCATTTATGAGGATCTGGGAACTATGGAAAGAACCTTCTTTCCGGTTGGCTCGCATCAGAAAAATGACACGCACATGATGCTTAATGGCATACCACTGGAGGGGCCTTGTGAGTATGAGGGTCAATTTCAAGTTGGGATTCCAAATCTAGAGCTTGGTTTGGGGGGCAAAACAAAACCACAGCCACCACTGGCACCACCACTACCACTGCATAAGGGTATGTTCCCTTTTCTTGTTGGACCTGTAGACAAGAAAAACAACCAGGAAAAACCACCTGAAGAAGTGGCGCATGAGCAAGAGGGTGATGACAGTGTTGCCGCCTCTCTTTCCCTGTCTCTATCATTCCCGTCTTCAAATAAGGAACCTCCGAAACCTGGTCCAAAAGCTGAACATTCACCTGATGACGATCGTGTGAATACTCCGTTTCTCCTTTTTGGGAGATACACAGACAAGTAA 4005 0.4192 MIQNADMKLESGTCNVCSSPCSSCMHLNRALTRSKAKEFSDENCRLGEANQSSTVEGDQSSHRSRTCERLNHASSETGNMLSVNSSHESLSENAESTRPLSEKHQDAKCLEGLDDNTSCISRTSNDDFVINDNTGVLSTRVYPKSESDSDSDVGNVKDKDHKVPVRDGLREKQGELVKSAVKPEAHSEDESDDSDVVEHDVKVCDICGDAGREELLAVCSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYAQEAENKRLAADKIVHKVSSTAHISGKRPLESEELAKAAKRQAHESSIGSPKGSSPKRIFPLSRESSFKNHDKGKLKSGDHSSICNHPDGNNRELARSLSAGPRSQTAKSTSLKSNSFNINSKPRVKLVDEVPQKNKGGSEQGSKNIETPGQMMSKSTSLKSSNLSRSSATESKDKMLTSKSGTTPDLKGSRLTKESERKFLSRVDRPIGCSTISTPKGDQKLSARGETAKPSAVSNRECQVNQDGRLNSLSKNNISRKSLTPLVSAESTTSGDETQSDGPPQSRELANHVDNTKDSSSDHVSPGESPLFHKSKDFSHATECVVANTQEFGLEGSTTAPYGSKDEIHKDNRLKAAIQAALLRRPEICKKKEVPVRTDEFSTSGTDLNSKVSFQDQAFVINTPKNILSTEETKARLEILYSPTFETSSSNGSRPVSFSPTDSHSQPRKLESVCPDPGKPVVRDLHNQTLAVSSFVSQISAFPEHQYIWQGEFRVHKNGKLPDLYTGIQAHLSTGASPKVLEVVNKFLPEVSLNEVSRMSTWPSQFHQRGAREDNIALYFFAKDIESYERHYKGLLDHMIRNDLALKGIFDGVELLIFPSNQLPENSRRWNMLFFLWGVFRGQRMNHSDSAGKVCIPSLNAVPVEKDFPTPVTTLSETHSSLKPMDGQSIACGRTCNAVLPPTSIDEGHTIFHGNFDIKETSCDQTCLGSQVNLHSLDSKINTESTSKIPSSSGQLCQEMHSTGSSLKDGQYRVSIPPEPMGTVLSSRIVETNSDCDISVKQEKQEIDTASNTSKNQISERINHDEDQQRPKRKLIEEDLNISVEATIQEDPTRRSINCQETNDKKVHHIDVPDAALKASADSYQKLPWDKVNGKLEGGESSNKKLKSGLSDIYGNCSSGGRESFNGSFTALENHPGTFSSVESRGCKEASFDKIIYEDLGTMERTFFPVGSHQKNDTHMMLNGIPLEGPCEYEGQFQVGIPNLELGLGGKTKPQPPLAPPLPLHKGMFPFLVGPVDKKNNQEKPPEEVAHEQEGDDSVAASLSLSLSFPSSNKEPPKPGPKAEHSPDDDRVNTPFLLFGRYTDK 1334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 349 374 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 1259 1334 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 1288 1302 - -
Stsc30382g00006 1334 PANTHER - 201 889 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 71 96 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 973 1001 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 278 292 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 973 999 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 271 564 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 388 441 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 315 333 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 1269 1284 - -
Stsc30382g00006 1334 ProSiteProfiles Zinc finger PHD-type profile. 201 252 IPR019787 -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 1034 1061 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 145 189 - -
Stsc30382g00006 1334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 264 IPR013083 -
Stsc30382g00006 1334 SMART PHD_3 203 250 IPR001965 -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 674 702 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 674 697 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 48 106 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 140 194 - -
Stsc30382g00006 1334 SUPERFAMILY FYVE/PHD zinc finger 190 254 IPR011011 -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 481 539 - -
Stsc30382g00006 1334 MobiDBLite consensus disorder prediction 442 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30382g00006 Stsc-Chr30382 43082 48645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30382g00006 200 268 C2H2 Transcription Factor Family AT3G01460 31.884 8.73e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30382g00006 - - ahf:112789342 2025.75