Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30382g00002 ATGGCTCCTTCTTCTCCGATTGTTACTGATTCACTGGATCCATCAACACCTCCCGAAACTCTTGACAACGATCTTCAGCCATTCTTCGTTCTTCACAAAGCTTCATCCCGAAGAAAAGATAGATCATCAATAGGACAAGGTAAATTGCGAAAAAGAAATGCTCTGTCTTCACTGCAGAGCACAAAGAAACAGGAAGGAAGTGTGAATGAAGAATATGACCGCCATTTGTTTCAACCATTACAAATTGAATCCTTCAACAGTGTTTGGTCAAGAATCGAGTCCACCATTAAGGATGTTTCGAGAGATATCAATTCTAGTGTATTTAAAGATATACAGCAATGGATTCTGGAGTGCCTCAATGCTGCTAGATTGCATGGAGAACCTAGTATCACAGAAGCAACTCGACCCCTCCCTATTCTGAGTAATGCTACTCTTGGTCAATTATCCACTGCATTGGTTATTACAAGAAATATAGAATTTGTTGATGATATATTGACCTTTGAAGAACTTGGCCATTTCTTGAAATCCCAAGGATGCCATGTAGCCATGCTTTCTTCAGTGGATGTTTCAATGAAGAACGGAATTGCTGGTTGCATAAAAGCTTTATTGCGAGAGTTTCCACTGGGTGAAATTGATTCAGCTGATATATCAATCCTAGCTTCATGGTATAGAGAACAAGACAACAACAATAAACCACTAGTGCTTATCATCAGTGATTTGGAAAGGTGTTGCGGATCTGTCTTAACGGAATTTGTCCTGATGTTGAGCGAATGGGTTGTCAAGTTACCAATCATCTTAATAATTGGAGTTGCAACAACAGTAGATGCCGTAAGAAATGCTCTGCCATCACGTGCTCTTGAGTGCTTATGTTGCTCCAAGTTTATGTTTGGAACACCAGATGAGAGAATGGATACAGTTGTTGAGGCTGTTCTTGTGAAACATTGCACGACATTTAATATTGGTCATGAAGTGGCACTCTTTCTGAGAAATTACTTCATCAACCAAGACGGAACATTAACATCTTTTATAAGAGCTTTGAAGTTAGCATGCTTGTTACATTTCTCCGTGCAACCTCTCTCTCTCATACATGGGCATCTGTTGGCAGAAGACCAAAAGGATGGGATATCTGCATTGTCACCTGAGATTTTGTTGAAATACATGGATGAATTTCCATCATATGATAGGAGTCAAACTGCGGGTCAAACTGGAAAGAGCATTGCCCAAGGTTTGTCAGATTTGGTGACAGAGCAAAAGCTATGGACAACTGCAGTTCTTTGCCTATGTGAAGCTGGAAAATATAGCAGAGTGCGACTGCTGGATTTGTTTTGCGAAGTGCTCAATCCAGATTTATACCCGCATAGGGATTCTGTTTGTCACATCAGGAATGAAAAAGATCAAGGGTTGTCTTCAACAAATGGCCACAGTCAACAATACTCTTTTGTTCAAAGCGGTGGTTTGATTCGCCAGATAGTTCGCAAAGTGAGGGATCTCCCTCCTGGAACACTTAGTCAATTGATTAAGAGTTGGGAAAAACTTACCGCAGATATTTCCGAGATTCATGATAAATTGAAAATGTTTCAATCTTCAGTAAGATGTGAGGAAAGAAGGAGTCCACGCAAGAGTTCCAAGAGATACGGATCCAAGGTTCCATTAGACATTGACAATGAATCGAGAATGTTAAACTCACAAGCTGTTGCATTTATAGATTGCTTAGTTAGAAATTATATGAGGCCAATCGAATGCATGCCTTTTCATGAAATTTCCTGCTTCAAGAATGTTGAGAAGCTTCAAAAGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGCTGATCTGTTGGATTCACATAGGATTTTAAGGTGCAGTTGCTGTAACAAAACTGGCAATGCCCTATTGCCATCAAGACAAGATTCCTCAATTATGTATTCCTTGGCTCAAGAGCATGGAGATCTTATCAATCTTCACGATTGGTTCCAGTCTTTTAGAACAATTATTCACCAAACGAATAAAAGGAAACCAAAGTCAAAGCAGTCACCCCAGCCAAAGAAGAGAAAAGATACAGCTGGATCTGGAGACCAAAATGAAGCACCAATCCAAGCACGGTTTTGCAGAGCAGTTACAGAAATGCAGATCACCGGGCTGCTTAGAATGCCCAGCAAGAGGCGCCCAGATTTTGTACAAAGAGTAGCATTTGGACTTTGA 2202 0.4028 MAPSSPIVTDSLDPSTPPETLDNDLQPFFVLHKASSRRKDRSSIGQGKLRKRNALSSLQSTKKQEGSVNEEYDRHLFQPLQIESFNSVWSRIESTIKDVSRDINSSVFKDIQQWILECLNAARLHGEPSITEATRPLPILSNATLGQLSTALVITRNIEFVDDILTFEELGHFLKSQGCHVAMLSSVDVSMKNGIAGCIKALLREFPLGEIDSADISILASWYREQDNNNKPLVLIISDLERCCGSVLTEFVLMLSEWVVKLPIILIIGVATTVDAVRNALPSRALECLCCSKFMFGTPDERMDTVVEAVLVKHCTTFNIGHEVALFLRNYFINQDGTLTSFIRALKLACLLHFSVQPLSLIHGHLLAEDQKDGISALSPEILLKYMDEFPSYDRSQTAGQTGKSIAQGLSDLVTEQKLWTTAVLCLCEAGKYSRVRLLDLFCEVLNPDLYPHRDSVCHIRNEKDQGLSSTNGHSQQYSFVQSGGLIRQIVRKVRDLPPGTLSQLIKSWEKLTADISEIHDKLKMFQSSVRCEERRSPRKSSKRYGSKVPLDIDNESRMLNSQAVAFIDCLVRNYMRPIECMPFHEISCFKNVEKLQKVLIGDPRRRIQADLLDSHRILRCSCCNKTGNALLPSRQDSSIMYSLAQEHGDLINLHDWFQSFRTIIHQTNKRKPKSKQSPQPKKRKDTAGSGDQNEAPIQARFCRAVTEMQITGLLRMPSKRRPDFVQRVAFGL 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30382g00002 733 MobiDBLite consensus disorder prediction 49 65 - -
Stsc30382g00002 733 MobiDBLite consensus disorder prediction 1 22 - -
Stsc30382g00002 733 MobiDBLite consensus disorder prediction 1 70 - -
Stsc30382g00002 733 MobiDBLite consensus disorder prediction 33 47 - -
Stsc30382g00002 733 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 76 361 IPR045667 -
Stsc30382g00002 733 CDD Orc3 83 731 - -
Stsc30382g00002 733 Pfam Origin recognition complex winged helix C-terminal 605 731 IPR040855 -
Stsc30382g00002 733 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 732 IPR020795 GO:0003677|GO:0005664|GO:0006260
Stsc30382g00002 733 MobiDBLite consensus disorder prediction 668 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30382g00002 Stsc-Chr30382 8452 16541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30382g00002 1 665 Core DNA Replication Machinery Family AT5G16690 45.640 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30382g00002 K02605 - gmx:100780646 1027.31