Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30380g00009 ATGGCGAGAAGGTTCTTCTTGAATGATTTTGTTCCTTTTGGTGCCATGGTCACCATGGAGTGTGTGAACGTTGGGTTGAACACTCTTTTCAAAGCAGCTACCATGAGAGGGATGAGCTACCATGTCTTCGTTGTTTATGCTTATGCTGTTGCTGCTATTGTGCTTCTTCCTGCTCCCTTCATCTCCTCAAGATCGAGAGTGCTTCCTCCTCTGACTTTTCCCATTGTAACTAAAATTGGTCTTCTTGGCCTGATCGGATGCTCATCTCAGATAATGGGGTACACAGGGATTAGCTTCAGTTCGCCAACACTTTCTTCGGCGATCAGCAATTTGGTGCCAGCTTTTACCTTCTTGCTCGCCATCGCTTTCAGGATGGAAAAAGTGGCTATGAAAAGTTCAAGCAGCCAAGCGAAGGTCTTGGGTACCATAGTATCAATATCGGGGGCATTCGTGGTAACTCTTTACAAAGGACCACCAATCATCATTATTCATGCGCCTTCTTTTTCGCTTCACCGTCCAATTAACGATCTCAGTTCGGTGGATCAAAGTTGGGCCATCGGCGGCCTTCTACTGATGGCTGAGTATATATTGGTTCCAATGTGGTACATTGTACAAGTGCAAATCATGAAGGTGTACCCTGCTGAACTAACTGTTGTCTTCTATTACAATTTATGCGTAAGCGTCATGGCTGCAATTGTTGGTATTTTTACGGAGACAAATCCAAGTGCTTGGAAAATAGGATTTGATACGGCATTGGCGTCTGTCCTTTGCTCTGGAATTTTTGGATCATTCTTGAACAATGCTGTCCATACATGGGTACTACGCATAAAGGGACCTGTCTACGTCGCAATGTTCAAGCCACTCTCGATTGCCATAGCTGTTGCCATGGGAGTTATGTTTCTTGGTGATTCTCTTCACCTTGGAAGTCTAATTGGAGCAACAATAATATCAATTGGATTTTACACAGTAATGTGGGGTAAAGCAACAGAAGAGGTGGATGAAAACATCTCAAACCCGGAGTTACCAGCTACACAGAACAATGTTCCTCTCTTGCAAAGCTATACAAGTGACTTATCTCAAAAGAAAAAGCATTCACCTGTATAA 1104 0.4357 MARRFFLNDFVPFGAMVTMECVNVGLNTLFKAATMRGMSYHVFVVYAYAVAAIVLLPAPFISSRSRVLPPLTFPIVTKIGLLGLIGCSSQIMGYTGISFSSPTLSSAISNLVPAFTFLLAIAFRMEKVAMKSSSSQAKVLGTIVSISGAFVVTLYKGPPIIIIHAPSFSLHRPINDLSSVDQSWAIGGLLLMAEYILVPMWYIVQVQIMKVYPAELTVVFYYNLCVSVMAAIVGIFTETNPSAWKIGFDTALASVLCSGIFGSFLNNAVHTWVLRIKGPVYVAMFKPLSIAIAVAMGVMFLGDSLHLGSLIGATIISIGFYTVMWGKATEEVDENISNPELPATQNNVPLLQSYTSDLSQKKKHSPV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30380g00009 367 PANTHER WAT1-RELATED PROTEIN 11 337 IPR030184 GO:0016020|GO:0022857
Stsc30380g00009 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30380g00009 Stsc-Chr30380 46322 50439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30380g00009 1 357 Nodulin-like Gene Family AT3G28050 59.621 2.29e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30380g00009 - - gmx:100814137 583.563