Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30380g00008 ATGATGAACAAGCCTTGGAAATTCTTTCACAAGGAAGTAGCTCCCTTTACTGCACTGGTAATAGTGCAGTTCACTGAGGTTGGTGTGAATATTCTATCAAAGGAAGCCACTACCAAGGGGTTGAGCTACTATGTCTTTGTCTTCTATTCCTTGCTTATCACCGATCTCATTCTGCTTCTTTCTTTGCCTTTCTTCATCCGCAGGTCAACTGGGCTTCCCTCACTTAATTTTTCTCTTCTCTGCAAAATTTTCTCCTTGGGTGTGCTTGTATTTTCAGCTCAGATTTGTGGAAATAAAGGTATTAAGTTGAGTTCGCCTAGTCTTGCTTCTGCTGTTGGCAACCTGGTTCCGGCGTTTATATTCATACTTGCTGTCCTTTTCAGGGAGGAAAACATAACTCTAAGGAGTTTAAGCAGTCAGGCAAAAATCTTGGGTTCAGCTGTATCAATAGCAGGTGCATTCATAGTTATTTTCTACAAAGGACCAACAATCTTGAATAATGATGCTTCACCATCACCATCCCCCTCGTTGAATTCCCCACTTGCCTCTTCACAATGGGGTTGGATTTGGGGTGGATTCCTACTAGCACTAGCCTATATTTTAGTGTCAATTTGGTACATTCTGCTGACCCATGTCATAAAATTGTATCCTGCAAAGATGATTGTGGTATTCTTGTTCACCTTGTTTGCGACTATCATAGCTGCCCCAGTCTGTTTTCTAGCGGAAAACAACTTGAGTGCTTGGACACTAAAACCTGATATAACATTGGTGGCTATTACATACTCGGGATTCTTTTGCACGTTCTTCACCACTGTGGTTAGCACTTGGTGTCTGCACCTAAAAGGCCCCGTCTATGTATCAATCTTTAAGCCCCTCTCAATTGTCATTGCTACTACTATGAGTGTCATATTCCTTGGTGAAGCTTTGTATCTTGGAAGTGTTGTTGGAGCAGTGATACTGGCTGCTGGGTTTTATTCTGTTATATGGGGAAAAGCAAAAGAAGAGGAACTGCTTGAAGATGAGAACCACTTGTCAGGTAGTGGTAACTCAGAATCCCAATCAAATGATAAGGTTCCTTTGTTGCAAAGTTCCAAGAGCGGAGATGTTTAA 1110 0.418 MMNKPWKFFHKEVAPFTALVIVQFTEVGVNILSKEATTKGLSYYVFVFYSLLITDLILLLSLPFFIRRSTGLPSLNFSLLCKIFSLGVLVFSAQICGNKGIKLSSPSLASAVGNLVPAFIFILAVLFREENITLRSLSSQAKILGSAVSIAGAFIVIFYKGPTILNNDASPSPSPSLNSPLASSQWGWIWGGFLLALAYILVSIWYILLTHVIKLYPAKMIVVFLFTLFATIIAAPVCFLAENNLSAWTLKPDITLVAITYSGFFCTFFTTVVSTWCLHLKGPVYVSIFKPLSIVIATTMSVIFLGEALYLGSVVGAVILAAGFYSVIWGKAKEEELLEDENHLSGSGNSESQSNDKVPLLQSSKSGDV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30380g00008 369 PANTHER WAT1-RELATED PROTEIN 14 343 IPR030184 GO:0016020|GO:0022857
Stsc30380g00008 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 160 - -
Stsc30380g00008 369 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Stsc30380g00008 369 Pfam EamA-like transporter family 30 157 IPR000620 GO:0016020
Stsc30380g00008 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 333 - -
Stsc30380g00008 369 MobiDBLite consensus disorder prediction 343 369 - -
Stsc30380g00008 369 MobiDBLite consensus disorder prediction 340 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30380g00008 Stsc-Chr30380 31149 38409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30380g00008 6 337 Nodulin-like Gene Family AT5G40240 52.994 2.15e-120 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30380g00008 - - gmx:100805667 389.423