Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30378g00014 ATGGCAACATTCAAGCAGGATACCTGTGAGAAGGTGAAGAAAGCTCTTCAGCCAGAGTGGCTTAAGTCTTTTCTGAAAAAGACTTTCTTTGGATCTTCCTGTGCAACTCATGCTGCGCTTAAGAATGAGTTAAACAGATACTGCATAACCTGTACTGAACCAATTTGCCAACATTGTGCATCTGGATCCAAACATGGTCCTCATAAGGTGATCAAAATCTACAGGCATCGTTAA 234 0.4145 MATFKQDTCEKVKKALQPEWLKSFLKKTFFGSSCATHAALKNELNRYCITCTEPICQHCASGSKHGPHKVIKIYRHR 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30378g00014 77 CDD Bbox2 34 73 - -
Stsc30378g00014 77 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 13 76 - -
Stsc30378g00014 77 ProSiteProfiles Zinc finger B-box type profile. 34 73 IPR000315 GO:0008270
Stsc30378g00014 77 SUPERFAMILY B-box zinc-binding domain 34 73 - -
Stsc30378g00014 77 Gene3D Classic Zinc Finger 32 75 - -
Stsc30378g00014 77 Pfam B-box zinc finger 33 73 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30378g00014 Stsc-Chr30378 79417 79786 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc30378g00014 zf-B_box 9.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30378g00014 - - ahf:112791659 115.931