Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30377g00001 ATGCATCCTCAGCAGGGGAGTGAAGTTGACAATTCGATGTTGCTTCCAAAGAATTTTAAACTTCCAAATAAATTAAGGTATCTTAAGTGGACAAACAACCCCTTCAGGTCTCTATCACTCACTTGCTGGCCACAAAAGCTTTTTATGCTTTCCATGCGTCACAGCAAAATCCAAAAACTCTGGGATGGAGAACAGAATCTGCCAAATTTGGAGATTATTAATCTCTCGTTCAGCATTCACTTGATAGAGTGCCCAAATTTGAATGGTTCGCCTAATCTCAAACGTATAGAATTTTTTCACTGTGAAAGCTTACAAGAAGTTCATCCATCTATTTTCCGTCTCCCCAAGATTGAACGAATAGATGTGAGCCATTGTAAGAAGCTGAAGAGGCTTTGCAGTGATTACTGTTCACCCTCACTTCAACGCTTGTTGGCTGTTGGTTGCTCAAATTTGGAAGAATTCTCAGTCCCAATAACAACGGCTCGCCATCCCAAAATCCTTGTATATTTAGCATCAACAGCATTGAGGGAAGTGCCAACCAATATTCTGCATCTCAAGAATGTTAACTTTAGTTTTAGCATAAGTTATTCCCTGGCTAAACTTCCTAGTAACTTTGCTACTACAATTGTACTCAGGGACGACCCTGAGAAACTTGAAGATGATACATGCATCATCTTAAGCAGAGTATTCCCTACCCCTGGGTTCTTGTTCCTCAAGAAATTAAGTTTTGTCGGTTGTAAGAGCTTGTCCAAACTGCCCGACAACATTGATGCCTTACAATCATTACAAACGTTATGGGTGTTAGAGTGTCCAATTATAACTTTGCCAGAAAGGATTAAGAATATCCGTCAGCTGATAGAACTTCTCATTTATGATTGTGAAAAGTTTCAATACTTACCTCCGCTTCCATCGTCTATTGAAATCATTCGTATAATGAAGTGCAAATCTTTGGAGAGAATCTCAAGTTTAACCAGCAAACTACCTCTCGGAAAACACAAGGCCATATTTAGATTCTATAATTCGGGCGTGAATTTGGATACACATGCATATGAGGCTGTTTTGAAAGACATGAAATCCAGGATGGTACTTGGGGTAATGGAGGATGGATATTCGAATGATGCTGCAAACGATTGTAATGCATGTTACTCTATACCATATCCATATGAGAGTAATAACATGCCTGATGATTGTTTCCCTCATGACTCTTCTAGAAAAGATTCTGTGGTCATTGTTGAAGTTCCTCCAGATCGCTGGATTTCTTCTGCTGGTCTTGTTTTCTACTTGCGTTTTTCTCAAGACCAACCTTGCGTCCTTGACAGCATGATATTTGGATGTGAATGCTACTTGAAGAATAGTTGCAATGAATGGGAGCGGATAGCATCTTCTTGCAATCAAGAATTGTTCGGAGATCTTGCTGACAGATGGGTCTCACCGTTAAAAATGGAGTCAGATCATATGGCACTATGGTATAATGCAAAGTGTTGCAACGCCATAAAGAAGGCAATCAAAGAGGGAAAGAGTTGCAATCCTACTCTTAAATTTGTTTTCTATGCTCACACTAAAGATAGTGCTGTGGAACTAGTGACCAAGGAGTGTGGGATTCGGTGGATGCATGTGGATTTCGTCAAAGACAAAGGAAATATTAGTCATGATGAAATGGGGGTCGTCGAGATAATTTTTCTATTTTATGAAAAAACATATACTATTTCTTGA 1713 0.3935 MHPQQGSEVDNSMLLPKNFKLPNKLRYLKWTNNPFRSLSLTCWPQKLFMLSMRHSKIQKLWDGEQNLPNLEIINLSFSIHLIECPNLNGSPNLKRIEFFHCESLQEVHPSIFRLPKIERIDVSHCKKLKRLCSDYCSPSLQRLLAVGCSNLEEFSVPITTARHPKILVYLASTALREVPTNILHLKNVNFSFSISYSLAKLPSNFATTIVLRDDPEKLEDDTCIILSRVFPTPGFLFLKKLSFVGCKSLSKLPDNIDALQSLQTLWVLECPIITLPERIKNIRQLIELLIYDCEKFQYLPPLPSSIEIIRIMKCKSLERISSLTSKLPLGKHKAIFRFYNSGVNLDTHAYEAVLKDMKSRMVLGVMEDGYSNDAANDCNACYSIPYPYESNNMPDDCFPHDSSRKDSVVIVEVPPDRWISSAGLVFYLRFSQDQPCVLDSMIFGCECYLKNSCNEWERIASSCNQELFGDLADRWVSPLKMESDHMALWYNAKCCNAIKKAIKEGKSCNPTLKFVFYAHTKDSAVELVTKECGIRWMHVDFVKDKGNISHDEMGVVEIIFLFYEKTYTIS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30377g00001 570 SUPERFAMILY L domain-like 16 323 - -
Stsc30377g00001 570 Gene3D Ribonuclease Inhibitor 5 137 IPR032675 -
Stsc30377g00001 570 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 155 IPR044974 GO:0006952
Stsc30377g00001 570 Pfam Leucine Rich Repeat 47 65 IPR011713 -
Stsc30377g00001 570 Gene3D Ribonuclease Inhibitor 138 334 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30377g00001 Stsc-Chr30377 772 3453 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30377g00001 7 295 WRKY Transcription Factor Family AT4G12020 27.181 4.46e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30377g00001 - - aip:107624696 504.982